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scnpilot_p_inoc_scaffold_267

Search features with annotation key words

Displaying items 31-60 of 133 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_267_31
unknown

Not on your lists

37396..38241
DNA (846bp) protein (282aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_267_32
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38241..38852
DNA (612bp) protein (204aa)
Possible Rhomboid family protein n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=Q4FV10_PSYA2
membrane protein
Membrane protein {ECO:0000313|EMBL:AGP47929.1}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. G.;"
scnpilot_p_inoc_scaffold_267_33
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38876..39286
DNA (411bp) protein (137aa)
Endoribonuclease L-PSP; K15067 2-aminomuconate deaminase [EC:3.5.99.5] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Endoribonuclease L-PSP n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IBD8_FLUTR
endoribonuclease L-PSP
scnpilot_p_inoc_scaffold_267_34
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

39380..41176
DNA (1797bp) protein (599aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDZ4_CHIPD
GTP-binding protein LepA
scnpilot_p_inoc_scaffold_267_35
unknown

Not on your lists

41367..42179
DNA (813bp) protein (271aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_267_36
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42407..42877)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Cyclobacterium marinum (strain ATCC 25205 / DSM 745) RepID=G0IY87_CYCMS
Uncharacterized protein {ECO:0000313|EMBL:KHJ38098.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter gluco
hypothetical protein
scnpilot_p_inoc_scaffold_267_37
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(42967..43761)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SGZ3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU25709.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sal
membrane protein
scnpilot_p_inoc_scaffold_267_38
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43858..44484)
DNA (627bp) protein (209aa)
id=3846133 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
id=3846133 Tax=GWF2_Bacteroidetes_38_335_curated
scnpilot_p_inoc_scaffold_267_39
unknown

Not on your lists

comp(44668..45045)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Pedobacter arcticus RepID=UPI0003098324
scnpilot_p_inoc_scaffold_267_40
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

45654..46358
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002DAF422
Uncharacterized protein {ECO:0000313|EMBL:KIC94350.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_267_41
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(46571..47149)
DNA (579bp) protein (193aa)
Thiopurine S-methyltransferase n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EV28_EMTOG
thiopurine S-methyltransferase
Thiopurine S-methyltransferase {ECO:0000313|EMBL:AFK03531.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (stra
scnpilot_p_inoc_scaffold_267_42
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

47169..50150
DNA (2982bp) protein (994aa)
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine d
Glycine dehydrogenase (decarboxylating) n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC63_CHIPD
glycine dehydrogenase
scnpilot_p_inoc_scaffold_267_43
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

50534..51337
DNA (804bp) protein (268aa)
Abortive infection bacteriophage resistance protein, abi_2 superfamily n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IJC2_PSYTT
abortive infection bacteriophage resistance protein, abi_2 superfamily
Abortive infection bacteriophage resistance protein, abi_2 superfamily {ECO:0000313|EMBL:AFU69918.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae
scnpilot_p_inoc_scaffold_267_44
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(51432..52058)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VU44_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIF31699.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
scnpilot_p_inoc_scaffold_267_45
Chryseobacterium sp. CF314, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52107..52664)
DNA (558bp) protein (186aa)
Dihydrofolate reductase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JX88_9FLAO
Dihydrofolate reductase {ECO:0000313|EMBL:EJL72490.1}; TaxID=1144316 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
riboflavin biosynthesis protein RibD domain protein
scnpilot_p_inoc_scaffold_267_46
Bacteroides reticulotermitis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(52794..53591)
DNA (798bp) protein (266aa)
Lipid A biosynthesis acyltransferase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C9L6_SPHS2
Lipid A biosynthesis lauroyl acyltransferase {ECO:0000313|EMBL:GAE86623.1}; TaxID=1445607 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroid
lipid A biosynthesis acyltransferase
scnpilot_p_inoc_scaffold_267_47
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

53857..54483
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VY57_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96958.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_267_48
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

comp(54588..56429)
DNA (1842bp) protein (614aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Saprospira grandis DSM 2844 RepID=J0NZQ6_9SPHI rbh
glucosamine--fructose-6-phosphate aminotransferase
Tax=BJP_IG2103_Bacteroidetes_41_9
scnpilot_p_inoc_scaffold_267_49
unknown

Not on your lists

comp(56469..57821)
DNA (1353bp) protein (451aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_267_50
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(57873..58703)
DNA (831bp) protein (277aa)
Starch synthase {ECO:0000313|EMBL:ACU61152.1}; EC=2.4.1.21 {ECO:0000313|EMBL:ACU61152.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitin
starch synthase n=1 Tax=Segetibacter koreensis RepID=UPI000382E341
starch synthase
scnpilot_p_inoc_scaffold_267_51
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

58923..59861
DNA (939bp) protein (313aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
Pantothenate synthetase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQZ6_NIAKG
pantothenate synthetase
scnpilot_p_inoc_scaffold_267_52
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists


59941..60441
DNA (501bp) protein (167aa)
30S ribosomal protein S16 n=1 Tax=Segetibacter koreensis RepID=UPI0003720DEA
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
30S ribosomal protein S16
scnpilot_p_inoc_scaffold_267_53
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

60564..61097
DNA (534bp) protein (178aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003604F01
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
16S rRNA processing protein RimM
scnpilot_p_inoc_scaffold_267_54
RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated, Bacteroidetes, Bacteria

Not on your lists

61109..61531
DNA (423bp) protein (141aa)
Fe-S metabolism protein SufE n=1 Tax=Segetibacter koreensis RepID=UPI000372865D
Fe-S metabolism associated SufE; K02426 cysteine desulfuration protein SufE Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_31_6_curated
Fe-S metabolism associated SufE
scnpilot_p_inoc_scaffold_267_55
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

61547..61852
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037FDC70
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60817.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
scnpilot_p_inoc_scaffold_267_56
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

61821..62303
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RUT4_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ16085.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterel
scnpilot_p_inoc_scaffold_267_57
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(62376..63869)
DNA (1494bp) protein (498aa)
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T919_NIAKG
GH3 auxin-responsive promoter
Uncharacterized protein {ECO:0000313|EMBL:KIC91342.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
scnpilot_p_inoc_scaffold_267_58
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

64116..65297
DNA (1182bp) protein (394aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TQE6_NIAKG
ATP-dependent Clp protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriale
scnpilot_p_inoc_scaffold_267_59
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

65357..66265
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035D180D
Uncharacterized protein {ECO:0000313|EMBL:GAO42857.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_267_60
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

66309..67130
DNA (822bp) protein (274aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TEC8_NIAKG
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:GAO43320.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
Displaying items 31-60 of 133 in total

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