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scnpilot_p_inoc_scaffold_92_42

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(47979..48560)

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 65.1
  • Coverage: 192.0
  • Bit_score: 276
  • Evalue 2.50e-71
Peptide deformylase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PB28_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 65.1
  • Coverage: 192.0
  • Bit_score: 276
  • Evalue 1.80e-71
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 65.1
  • Coverage: 192.0
  • Bit_score: 276
  • Evalue 5.00e-72

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
ATGATTTTTCCGATTGTAGCGTATGGACACCCTGTATTGAGAAAGGTGGGAACTGATATAGACGCTGGTTATCCCCAGTTGGAGGATATAATTAAAAATATGTGGGAAACCATGTATCATACGAACGGAGTAGGGCTTGCGGCTCCCCAGGTGAACCTTCCCATCCGTTTATTTGTTGTAGATACCGTACAGATAGTAGAGGGCTTTGATGAAGAGGATAAAAGGGATTATCCTGATGAGAAGCCTGTAAAGAAAGTATTTATCAATGCTCATATCGAATCGCTGGAAGGTGAGGAATGGAAATATAATGAGGGTTGCCTGTCCATTCCCAGGATAAGGGAGGACATTTCAAGGGCATCAACGGTGACCATGCGGTATATGGATGAGAACTTTGAAGAGCATACGGAAACATTTGAAGGCATCACAGCCCGCGTGATCCTGCATGAATACGACCATATAGAAGGGAAATTGTTTATAGATTACTTATCGCCGCTTAAAAAGAAACTGATAAAAAAGAAGCTGGAAGATATTTCAAAGGGCAAGGTGAACATTGGGTATCGTATGCTGTTTCCTAAAAAATAA
PROTEIN sequence
Length: 194
MIFPIVAYGHPVLRKVGTDIDAGYPQLEDIIKNMWETMYHTNGVGLAAPQVNLPIRLFVVDTVQIVEGFDEEDKRDYPDEKPVKKVFINAHIESLEGEEWKYNEGCLSIPRIREDISRASTVTMRYMDENFEEHTETFEGITARVILHEYDHIEGKLFIDYLSPLKKKLIKKKLEDISKGKVNIGYRMLFPKK*