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scnpilot_p_inoc_scaffold_33_260

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 330056..331222

Top 3 Functional Annotations

Value Algorithm Source
Putative two component, sigma54 specific, transcriptional regulator n=1 Tax=Niabella soli DSM 19437 RepID=H1NMP1_9SPHI similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 386.0
  • Bit_score: 503
  • Evalue 1.40e-139
Putative two-component response regulator {ECO:0000313|EMBL:GAO43936.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 66.3
  • Coverage: 386.0
  • Bit_score: 504
  • Evalue 1.10e-139
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 384.0
  • Bit_score: 502
  • Evalue 1.50e-139

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Taxonomy

Flavihumibacter petaseus → Flavihumibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1167
ATGGGGAAAAAAATATTAGTCATAGATGATGAAAGGGCGATCCGGAACTCTTTGAAAGAGATCCTGGGATTTGAAGGCTATGATGTGGAAACGCTGGAGGACGGCGCCGCAGCAATAGCGTTTATAAGATCGGATCAGCCTGTTGATTGCGTATTATGTGACATCAAGATGCCCAAGGCTGACGGTATGGAAGTGCTGGACGCTATGATAAGCGAACGTCCCGATACGCCCATAGTGATGATCTCAGGCCATGGTACCATTGATGTGGCAGTGGAAGCCGTTAAAAAAGGGGCGTATGATTACCTGTCAAAGCCGCCGGATCTGAACCGGCTGCTGATAACGATCAAGAATGCCACCGAAAAGCTCCACCTCATCAGGGAAACCAAGACGCTGAAGAAGAAAATAGCTAAAAGGGATGAGATCATAGGGCAGACGGCTGCCATACTGGAGATACTGGATATGGTGGAAAAGGTCGCTCCCACCGATGCCAGGGTGCTGATAACCGGCAGTAACGGCTCGGGGAAAGAGCTGATCGCGCAGCGTATACATAATATAAGTAACCGCAGCCATACCGATATGGTGGAGGTCAACTGCGCCGCCATACCATCCGAGCTTATTGAAAGCGAATTGTTCGGTCATGAAAAGGGCTCCTTTACTTCGGCCATCAAGCAGCGGGTAGGTAAGTTTGAGCAGGCGGACGGGGGCACGCTTTTCCTGGATGAGGTGGCTGATATGAGCCTGTCTGCCCAGGCCAAGGTGCTGCGTGTATTGCAGGAAGGCAAGCTGACCCGCGTAGGCGGCGAAAAGGAGATCAAGGTGAATGTGCGTGTCATTGCCGCTACCAATAAGGACCTGAAAGCGGAGATAGCGAAGGGTAATTTCAGGGAAGACCTGTACCACCGCCTGGGCGTGGTGCTGATCAACGTGCCTTCTTTGAACGAAAGGCGGGATGACATTCCCTTACTGATCAGCAGCTTCCTGGAGGATATATGCGAGGAGTACAGGGTGCCTGTAAAGGATATTTCCGGTTCGGCGATGCAACTGCTGAAAGAGTATGACTGGACGGGCAATATCAGGGAGCTGAAGAATGTGGTGGAACGTCTGGTGATTTTTTCGGATCATGAAATTTCGCAGGCGCACGTAGAGAAATATATCTTAATGAAATAG
PROTEIN sequence
Length: 389
MGKKILVIDDERAIRNSLKEILGFEGYDVETLEDGAAAIAFIRSDQPVDCVLCDIKMPKADGMEVLDAMISERPDTPIVMISGHGTIDVAVEAVKKGAYDYLSKPPDLNRLLITIKNATEKLHLIRETKTLKKKIAKRDEIIGQTAAILEILDMVEKVAPTDARVLITGSNGSGKELIAQRIHNISNRSHTDMVEVNCAAIPSELIESELFGHEKGSFTSAIKQRVGKFEQADGGTLFLDEVADMSLSAQAKVLRVLQEGKLTRVGGEKEIKVNVRVIAATNKDLKAEIAKGNFREDLYHRLGVVLINVPSLNERRDDIPLLISSFLEDICEEYRVPVKDISGSAMQLLKEYDWTGNIRELKNVVERLVIFSDHEISQAHVEKYILMK*