ggKbase home page

scnpilot_p_inoc_scaffold_33_289

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 365119..365703

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, LuxR family n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KXE3_HALH1 similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 193.0
  • Bit_score: 218
  • Evalue 4.40e-54
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 194.0
  • Bit_score: 218
  • Evalue 1.20e-54
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEE49351.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobact similarity UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 194.0
  • Bit_score: 218
  • Evalue 6.20e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Haliscomenobacter hydrossis → Haliscomenobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
GTGATCAGGGATGCCTACCGGTTTTTTATAGAGCAGCAGCAATCCTGCAAGGTGGTGGGTGCCTATCCCGGGGTGGAAGCTGCCCTGCCGCATCTGAAGGCATTAGACCCGCACGTGGTATTCCTGGATATAGAATTGCAGGGCATGAACGGGGTGGAGGGCATTTCCCGCATCAAGGAGCTGGTGGCTGACGTATATATTATAATGCTGTCCGTATATGATAGTCCGCATTATGTTTTTACCGCGCTGGCCAACGGCGCGTCGGGCTATCTTACCAAGGACGCCGGCCCGGAAAAGATCGTAGGCGCCATAGAGGAGGTGCTGACGGGCGGGGGGCCTATGACCAGCAATATTGCCCGTATGATCGTGTCGTCCTTCCAGAAGAACAGGGAGTCGCCGCTCACCAAGAGGGAAACGGAGATACTGGAATTCCTCAGCCAGGGCAAGACCAGGACCATGATCGCGCAGGAGCTGTTTATAGATGCAGAGACCGTAAAGTCGCATGTGAAGAATATCTATGCCAAATTGAATGTCCATTCCAAAGCGGATGCCATCCGGAAGGCAAAACAGAATAAATACATTTAA
PROTEIN sequence
Length: 195
VIRDAYRFFIEQQQSCKVVGAYPGVEAALPHLKALDPHVVFLDIELQGMNGVEGISRIKELVADVYIIMLSVYDSPHYVFTALANGASGYLTKDAGPEKIVGAIEEVLTGGGPMTSNIARMIVSSFQKNRESPLTKRETEILEFLSQGKTRTMIAQELFIDAETVKSHVKNIYAKLNVHSKADAIRKAKQNKYI*