ggKbase home page

scnpilot_p_inoc_scaffold_33_301

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 381339..382082

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 51.0
  • Coverage: 243.0
  • Bit_score: 243
  • Evalue 2.30e-61
tRNA pseudouridine synthase A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB28_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 51.0
  • Coverage: 243.0
  • Bit_score: 243
  • Evalue 1.60e-61
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 243.0
  • Bit_score: 243
  • Evalue 4.60e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 744
ATGTACAGGTATTATCTGGAGGTAAGCTACGACGGGACTGCCTTTGCCGGTTCCCAGGTCCAGGTGCGGCAGCGGACGGTCCAGGGCGCAGTGAATGAAGCCTTATCTACTATTTTAAGAGGAACTGTGGAAACGTTCGGGGCCAGCAGGACGGATATGGGTGTGCACGCGCTGTGCAATGTCTATCATTTTGATGTGCCGGTATTACTGGATGAGCAGCAGCTGCTCTATAAGCTGAACGCTGTTACGGCTCCTTCCCTGGGATTTAATGCCTTATATCGTGTACCCGGTAATGCCAACGCGCGCTTTGATGCCCTGAGCCGGACATACAGGTACAGGATCTATTTCCGGAAGGACCCGTTTAAATACGGGAGAGCCCTGTTCTATCCCTTTAAGCTGGACCGGGATACGCTGCACGATACGGCGGCCGTATTGTCGGATTACACGGACTTTACGTCTTTTTCCAAGAAGAACTCCCAGACCTTCACCAATAACTGTCAGATCATGAGGTCCTGCTGGGAGAGCCGTGAGGATGAGCTGCATTACGTGGTGGAAGCCAACAGGTTCCTGCGGGGAATGGTTCGCGCATTGGTGGGCACGCAATTGAAAATAGCAAGGGCGGGCCTGGCGGCGGCGGATTTCAGGGCGATCATCGAGGCAAAGGATTGCAGCAAGGCAGACTTCAGTGTTACCGGAAATGGATTATATTTGGAAAAGATAACTTATCCGCCTTATACGCTATAG
PROTEIN sequence
Length: 248
MYRYYLEVSYDGTAFAGSQVQVRQRTVQGAVNEALSTILRGTVETFGASRTDMGVHALCNVYHFDVPVLLDEQQLLYKLNAVTAPSLGFNALYRVPGNANARFDALSRTYRYRIYFRKDPFKYGRALFYPFKLDRDTLHDTAAVLSDYTDFTSFSKKNSQTFTNNCQIMRSCWESREDELHYVVEANRFLRGMVRALVGTQLKIARAGLAAADFRAIIEAKDCSKADFSVTGNGLYLEKITYPPYTL*