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scnpilot_p_inoc_scaffold_72_107

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(121767..125000)

Top 3 Functional Annotations

Value Algorithm Source
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD sub similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 999.99
  • Bit_score: 707
  • Evalue 2.40e-200
Exodeoxyribonuclease V, gamma subunit n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PDT3_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 999.99
  • Bit_score: 707
  • Evalue 1.70e-200
  • rbh
exodeoxyribonuclease V subunit gamma similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 999.99
  • Bit_score: 707
  • Evalue 4.90e-201

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 3234
ATGTCTATCCAGTTGTATGTATCTAACCAGTTGGACGGTCTGTTCCGGCAGTTGCGCTCAGGGATGCAATCCCGGGTGCCTCCGGTATTCCAGCCGTATCATATCGTCTCCCAGACGGAGGGGATGAATATCTGGCTGAAGCATCAGCTGGCTGCAGGCTGGGGCATCGCATCCAATATCAGGTTCTCCAGGCCCAATGATATTCTCTTTGTGGTCTATCTCGCGCTGGGCGGGGCCTTCCAGGTAACGCTGAACCGGCAGAGCTATGTATGGATGCTCTATAATATCCTGGGGACGGAAGAATTTAAAACGCGTTTCCCCGAGCAGGCGACCTACCTGCTGGATACCACGCACGATACGGACATAAAGCGCCTGCTGCTAGCGGAAAAGGTAGCAGACTTGTTCGACCAGTACCAGATATACCGGCAGGAGTTCATAGAAGAATGGAGCGCTATGAGCCCGGACAGCGCGCCGCACTGGCAGGCATACCTGTGGAGCAAAATAGAGGCCCGGCACCGGCAGGAATCCTCCGAATACCATAATATCAATTATGTCAGGAACTATATCCTGCAGCATATAGACGACCCGGAAAAGCATAGGCGGCTCCGGGAGCAGTTGCCTGTCATCTATCTTTTCGGCCTGTCCGTATTTACCAAATATCACCTGGAGGTATTTTACCGGCTTGCGAAATATATTGATATCTGTTTCTACCTTATCAATCCCTCCCCGTTCATTTACTGGGGGGATGATAACAGTGAGAGGGATATCGCCTTGTGGAAAGCCAAAGGGTATGTGATCAATGAGCATTATACGATCGGTAACGAGCTGCTGGTGAGCTGGGGTAAAATGATACAGCAGACCATCCGCCTGCTCTTCCGGAACGAGGAGCTGATCAATGCCTACGAGCCGGTAGCGGTGAGCGAGCCTTCCAATACGACCCTGCTGTCCAGGGTCCAGTTCGAGATATTTCACAATATGACGCTTTCGGAAAGGGATACGATCCCTTATGATTTTTTAAGGGACGGCACCATCCAGGTACACCGGCATTATACCCCGCAACGGGAAGTGGAGGGCCTGTACAACTACCTTGTCCGTCTTGTGACGGAGGAGCAGCCGGACATCCGCGCCAGGGATATACTGGTGGTGTGCAGTGATGTGAATATATATGCGGCTTTTATAGAAGGGGTGTTCTCCAATGCGCCGGTGCCTTTCCGGTACAAGATCGCGGATACCTATGTTTCGGAGGGCGATACGCTGCCGGGAGCGCTGCTGGAAATACTGAGCCTGAAAGAGGATAGCTGTACGGCAGAGCAGGTGCTGGGCCTGCTGGAATTCAGGGCGATCAGGGAAAAAACGGGAATCCGGGATATCGGCCTGGTACGCAGCATCGTGCAGGAGGCCAATATCCGCAGCGGGTGGCGGGGGCATACCGGGGACCAGACCTATACGATGAGCTGGTGGAACGGCGTGCGGAGGATGATGTACGGTATCTGTATGAGCGGTGAAGACCTGGTGGCAACGGAGGACGGGAGCGATTTCTATCCCCTGGATGTCGTGGAAGGTATGGCCTCGCAGGACGTGATACTATTCTCCGCCTTTGTAACGCAACTGATGAAAAGCGTGGAGCAGCGCTATAAAGCCCGTACGGTGGCGGAATGGCTGGAATATGTCAGAGGTGTGACGGCTGCCTTCCTGCAGCAGGATGAGGAAGTGATGGGAGAGGATATGAAATACCTCCATAGCCTGATGAACGAATATGCCGAAGCGTCCCGGTTCTTCCAGGAGCCGCTGGCATACGATATTTTCCAGCGCAGCTTTGTGCAGCAACTGTCTGGAGATGTAAGATCAGGCCTGTTTTATAACGGCGGGATTACCTTCTGCTCCGTGGTCCCGATGCGGAGCATTCCCTTTAAGGTGGTGGCGATGCTGGGTATGGATGATGATAAATTTCCCCGGAAGGAAAAGCGGCTGAATTTTAACCTGATGCAGGACCGGCACCAGCTGGGAGACAGGAACCTGAAGGACAGCGATAAGCACCTGTTCCTGGAAACGGTGCTGTCCGCGCAGAGCCGGCTCTACATCAGCTATAATGCGCGGTCTCCAAAGGATAATACGCTCAAAAACCCGTCCGTGCTGATCAATGATCTCCTGGTGTACCTGCAGCAGCGGGTACCGGCGGGAGTGAACGTGGAAGAGGAGCTTTGCATACAGCATCCCCTGCACAGCTTCAGCGCCCGTTATAATGACCCGGCGTTTCCCGGTCTGTATTATTATAATAAACCGGCTGGCACGGCGGTCAAAAGAATAGCGCCTGTGCCGGCGGTGAGGGAGGCGACTGCGCTGCCCCCTGAGCTGAACCTCGCCGTACTGGTGCAGTTCGTCAGCTCGCCTTTAAAATATTTTTACCGCCAGGTGCTGGGTATCCGCCTGGAGCAGTCGCCTGATGCCATAGAGGACCAGGAGATGTTTGTCTTTACAGGTGAGGATGGCCTGGCCCGTTTCCGGCTGCATCATGAAATATACCAGTCTGTTTTTGAAGGAAAGGATAAAGAAGGCTTTTTACGGCAGGGCCAGCTGAAAGGGCTGCTGCCGCTTAAGAATGTAGGCGCGTATTACGTGGACAGGTACTGGACGGATATGAAGCAGAAGCTGGACACGCTGATACCGGAAGCCGGTAGTGATCTTAACCGGACCCGCTGGAGCATAGCGGTTGGCGGTACTATTTTGCATACGGAGACCCTTACCCTCGGCCGGACGATGTACCGGGTTGTCTTCTCCTCCAATTACGATAAGCATCTTGTTGGCTGTTACCTGGATGCCGTAGCGGGGAGGGCACTGGATGCCATAGATACGGTCTGCATCGTGAAATACAGGGAAAAGGATGAGGAAAGGTCGCTGGCCAGGATAGACCTGTCCGGCATCACGCCCGCGGCGGCCCTGGACTACCTGGAAGCCGTGCTGAGATACTGGCTTGCCGGCAGTGAGCATCCCCTGGAAATGGATGTGCTGTTCTACCCGTACCTTACGGACACGGAGACCGGGGATATGGCCTTATCTCCCGGAGCCCTGGATAAGGAAAAGGTCATCAGGCAGGTGGATGATCCTTACTGGAATATGTACTACCGGCAGACAGCGCAGGAAAGAGACAGTGCCGGCTGGAACAGTGAAGCATTTTATAAAGATATAATTTTACCCCTCAGAGAATTTATAGCACATAAGCATGATACCGAATAA
PROTEIN sequence
Length: 1078
MSIQLYVSNQLDGLFRQLRSGMQSRVPPVFQPYHIVSQTEGMNIWLKHQLAAGWGIASNIRFSRPNDILFVVYLALGGAFQVTLNRQSYVWMLYNILGTEEFKTRFPEQATYLLDTTHDTDIKRLLLAEKVADLFDQYQIYRQEFIEEWSAMSPDSAPHWQAYLWSKIEARHRQESSEYHNINYVRNYILQHIDDPEKHRRLREQLPVIYLFGLSVFTKYHLEVFYRLAKYIDICFYLINPSPFIYWGDDNSERDIALWKAKGYVINEHYTIGNELLVSWGKMIQQTIRLLFRNEELINAYEPVAVSEPSNTTLLSRVQFEIFHNMTLSERDTIPYDFLRDGTIQVHRHYTPQREVEGLYNYLVRLVTEEQPDIRARDILVVCSDVNIYAAFIEGVFSNAPVPFRYKIADTYVSEGDTLPGALLEILSLKEDSCTAEQVLGLLEFRAIREKTGIRDIGLVRSIVQEANIRSGWRGHTGDQTYTMSWWNGVRRMMYGICMSGEDLVATEDGSDFYPLDVVEGMASQDVILFSAFVTQLMKSVEQRYKARTVAEWLEYVRGVTAAFLQQDEEVMGEDMKYLHSLMNEYAEASRFFQEPLAYDIFQRSFVQQLSGDVRSGLFYNGGITFCSVVPMRSIPFKVVAMLGMDDDKFPRKEKRLNFNLMQDRHQLGDRNLKDSDKHLFLETVLSAQSRLYISYNARSPKDNTLKNPSVLINDLLVYLQQRVPAGVNVEEELCIQHPLHSFSARYNDPAFPGLYYYNKPAGTAVKRIAPVPAVREATALPPELNLAVLVQFVSSPLKYFYRQVLGIRLEQSPDAIEDQEMFVFTGEDGLARFRLHHEIYQSVFEGKDKEGFLRQGQLKGLLPLKNVGAYYVDRYWTDMKQKLDTLIPEAGSDLNRTRWSIAVGGTILHTETLTLGRTMYRVVFSSNYDKHLVGCYLDAVAGRALDAIDTVCIVKYREKDEERSLARIDLSGITPAAALDYLEAVLRYWLAGSEHPLEMDVLFYPYLTDTETGDMALSPGALDKEKVIRQVDDPYWNMYYRQTAQERDSAGWNSEAFYKDIILPLREFIAHKHDTE*