ggKbase home page

scnpilot_p_inoc_scaffold_267_67

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 73733..75538

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XZN4_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 574.0
  • Bit_score: 410
  • Evalue 3.20e-111
  • rbh
Contig29, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77794.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 613.0
  • Bit_score: 420
  • Evalue 5.70e-114
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 574.0
  • Bit_score: 410
  • Evalue 9.00e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter sp. NL19 → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1806
ATGGTATATGCGCAGGAGCAGGCAGATACGCTGGACGGCGTGCGCTACAATATCGCTCCGCTGGTTAAAAGCGTACAGGAGTATAAGAATAAGCAGCAGCTGGTGCTGGATGAAACAGCGCTTAAATATTCCAATGCCACAACAGTGGACCAGCTGCTGCGCAGTGTAGCCGGCATAGACATCCGGCAGCGCGGACCGGCAGGCGTACAAAGTGATATTGCCATAGACGGCGGTACCTTCGACCAGGTGATGCTGCTGGTCAACGGGCTGAAGATAGCAGACCCGCAGACAGGTCATAATATGATGATGCTGCCTTTTGAGATCCAGAACCTGCAGCAGGTACAGGTGATCAAGGGTGCGGCGTCCAGCATGTACGGTGTCAACGCGCTTACGGGCGTGGTGAATGTTATAACCAAAGAGACGGACCGGAATTACCTGGATATTACCTTATCGGGAGGAAGCTCCTTAAAAAGGAACGAGCAGGAGCAGCTATACTATAATTCAGGCGTGGTGCTGCAGGGAGGATTGAAGACGGGTAGTTTCTCCCATAATTTCAATGCCGGCTGGAAATACGGGAACGGCTACCGTCCCAATACGGCCTATAACTCTCCCAATGCCTGGTATGATACCAGAGGCAGGATCGGGAAGCATCATTTGCACCTGATGGGCGGGTACCGGTATATGGACTTCGGGGCTAACGGCTTTTATGCCGCTCCCGGGGACAGCAACAGCCACGAGACCGTCCAGAATACGATCCTGGGGCTGAAGCACCTTGTACCGCTTCACAGGCAGCTTGTATGGACCAATGATGTTGTCTATAATTACAAGACGGATGACTATAAGTATATAAAGGAACCTGTGCTGGGACACAATAAGCATTTTCAGAATATCGTGAACCTTACGTCCGCGCTGCAGTACAAAAGCAGGATCGGTACTGTAAAGCTGGGCCTGGAGTTCAGGAATGAGCAGCTGCACAGCAGCAACCTGGGCACGCACCAGCGTTTCAATACCGGTGTGCTGTTCAATTATGACGTGCTCTTAGCGAAAAAGTGGTCTGTAGAAGCAGGCGCTTATGCCAACCAGCATTCCAGCTACGGCTTCCAGCTATATCCCAACCTGGGCATCGGTTATTTCCTGGGCAGCCATTCCAAGCTGATAGCCAATATCAGCTCCGGTCAGCGGCTGCCTACCTTTACAGATCTTTATTACCAGCAGCGAGGTGTGATAGAGGGCAATGCCGGCCTGAAGCCGGAACAGGCCATCAATACCGAGATAGGCTACCAGGCGAAATGGCAGGAGATGCAGTTGAATACCTATGTCTTTTACAGGTCTATAGACCGCTTCATAGACTGGACAAAAGCCGATGTGAATGATGTATGGCGGCCTGCAAACTATCACCAGCTGAATACCTGGGGATACCATATCTCCCTGTCCCAGGACCGTCAGTGGAACGATCATATAGCGGCCGGCTACAGGCTGGGATATAATTACCTGCATCCCGACCTGAAAGAGCAGGAAGGCGGCATTATTTCAAGATATGCGGTGAATGCATTGCGGCATCACTTTATACTGAGCGTACATACCCTGCTTTGGGACAGGCTGAAGCTGCAGGCGGGCGCCAGCTATCAGTCCCGTATCTCCTATAAGGATTACTGGCTGATGGATGCAAGCATCGTATATACCCGTTCGAAGTGGGAAGCAGGCTATAACGTTCAGAATTTAGCAAATGTGACCGTAACGGAGGCCGGAGCGAACCCGCTGCCCGGTACCTGGATGCAGCTATTTTTGAAATATGCTATCCGTTAA
PROTEIN sequence
Length: 602
MVYAQEQADTLDGVRYNIAPLVKSVQEYKNKQQLVLDETALKYSNATTVDQLLRSVAGIDIRQRGPAGVQSDIAIDGGTFDQVMLLVNGLKIADPQTGHNMMMLPFEIQNLQQVQVIKGAASSMYGVNALTGVVNVITKETDRNYLDITLSGGSSLKRNEQEQLYYNSGVVLQGGLKTGSFSHNFNAGWKYGNGYRPNTAYNSPNAWYDTRGRIGKHHLHLMGGYRYMDFGANGFYAAPGDSNSHETVQNTILGLKHLVPLHRQLVWTNDVVYNYKTDDYKYIKEPVLGHNKHFQNIVNLTSALQYKSRIGTVKLGLEFRNEQLHSSNLGTHQRFNTGVLFNYDVLLAKKWSVEAGAYANQHSSYGFQLYPNLGIGYFLGSHSKLIANISSGQRLPTFTDLYYQQRGVIEGNAGLKPEQAINTEIGYQAKWQEMQLNTYVFYRSIDRFIDWTKADVNDVWRPANYHQLNTWGYHISLSQDRQWNDHIAAGYRLGYNYLHPDLKEQEGGIISRYAVNALRHHFILSVHTLLWDRLKLQAGASYQSRISYKDYWLMDASIVYTRSKWEAGYNVQNLANVTVTEAGANPLPGTWMQLFLKYAIR*