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scnpilot_p_inoc_scaffold_267_101

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(113200..113778)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination/antitermination protein NusG n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUF8_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 65.8
  • Coverage: 184.0
  • Bit_score: 260
  • Evalue 1.70e-66
NusG antitermination factor similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 184.0
  • Bit_score: 260
  • Evalue 4.80e-67
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 184.0
  • Bit_score: 260
  • Evalue 2.40e-66

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGAGCGACAATCAGACTACAACCAATACTACCGACCAGGTGACCAAATGGTATGTATTACGTATAGTGAGTGGTAAAGAGAAAAAAGTAAAGGAATACCTGGATAAGGAAATCCAGATCAATGGCTGGTCTCATGCTATTACTCAGGTGCTGTGTCCCACAGAAAAAATATTTAAGATCCAGAACGGAAAAAAGGTCTTAAGAGAAAAGATCCTGTACCCCGGCTATATCATGCTGGAAGCGCTGGACGGTAAGCTGAACGATACGATGATCCAGGGCATACAAAGCGTGACCAATGTGATACATTTCCTCGGGAAAGAAAATCCCATAGCGCTCAGGAAGTCCGAGGTCAACAAGATGTTCGGTAATATTGATGACGTGGCTGAGCAGGGCATCGGCTTTGCAGAGCCATTCATTGTAGGAGAGACCGTCAAGATCATTGACGGCGCGTTCAATGACTTCAATGGCGAGATAGAAGAGGTGAATGAAGAGCGTAAGCGCCTTAAGGTTGTGGTAAAGATCTTCGGACGCCCCCAACCCGTGGAGCTCAGCTTTATGCAGGTGGAAAAGATCGTTTAA
PROTEIN sequence
Length: 193
MSDNQTTTNTTDQVTKWYVLRIVSGKEKKVKEYLDKEIQINGWSHAITQVLCPTEKIFKIQNGKKVLREKILYPGYIMLEALDGKLNDTMIQGIQSVTNVIHFLGKENPIALRKSEVNKMFGNIDDVAEQGIGFAEPFIVGETVKIIDGAFNDFNGEIEEVNEERKRLKVVVKIFGRPQPVELSFMQVEKIV*