ggKbase home page

scnpilot_p_inoc_scaffold_334_111

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(117474..117839)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Pedobacter agri RepID=UPI00029ADFF8 similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 122.0
  • Bit_score: 131
  • Evalue 4.50e-28
CopY family transcriptional repressor {ECO:0000313|EMBL:KIA96668.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 51.7
  • Coverage: 118.0
  • Bit_score: 133
  • Evalue 2.80e-28
CopY family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 119.0
  • Bit_score: 129
  • Evalue 6.20e-28

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 366
ATGATACAGCTTACAAAAACAGAAGAAGAGATCATGCACATTATCTGGAAATTAGGAAAGTGCCTGGTCAGCGATATTATACAGGACCTGGCAGAGCCGGACACCCCGCACAGCACTGTATCCAGCGTAGTACGTATCCTGGAGAAAAAGGGATTTGTAAACCATAAGGCCTATGGAAGGACCTATGAATACTATCCTGTCATCTCTAAAGAGCAATATGCACAAGCCGGTTTTAAAAACTGGTTCAGCAATTTTTTCAACAGTTCAGCGACGGAACTAGCGTCCTTCCTGGTAAAAGAAAAGGCGCTGAAGCCAAAAGAGATAGATGCCCTGATGCAACAATTGGAACAACTTAAAAAGAAATAA
PROTEIN sequence
Length: 122
MIQLTKTEEEIMHIIWKLGKCLVSDIIQDLAEPDTPHSTVSSVVRILEKKGFVNHKAYGRTYEYYPVISKEQYAQAGFKNWFSNFFNSSATELASFLVKEKALKPKEIDALMQQLEQLKKK*