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scnpilot_p_inoc_scaffold_302_8

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 6884..7468

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0 similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 193.0
  • Bit_score: 327
  • Evalue 1.20e-86
peptide deformylase n=1 Tax=Capnocytophaga cynodegmi RepID=UPI0003736923 similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 193.0
  • Bit_score: 282
  • Evalue 4.30e-73
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 192.0
  • Bit_score: 236
  • Evalue 5.80e-60

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Taxonomy

Chryseobacterium sp. JM1 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 585
ATGAAGTTACCGGTTTACGGATATGGGAATAATGTGCTGAAAATGACAGCAGATAAGGTGGAGCAGGATTATCCCGGACTGGATACGCTCATTGCCGATATGTGGGAAACGATGGAAAACGCACAGGGCTGTGGACTGGCTGCACCGCAAATTGGCAAGCCGCTTCAGCTCTTTGTAGCGGACAGCAAAATTCTGTTTGATAATATGGGAGAAACAGAACGGAAAGATGTTTTTACCGAAGGAGATACGGGCATCCGGGAAGTATTTATCAATACAGAAATTATAAGCCTTTCTGAAAACAAATGGGAAGAAACGGAAGGTTGTTTGAGCCTGCCATTTCTGTCCGGCAAGGTGGTTCGTTCCTGGTCTGTGGAAGTGCAGTATCAAAATCAGCATTTTGAAACCATACAGAAAAAGTTTAGCGGAATGACTGCCCGTGTTATCCTGCACGAATACGACCATACGCAAGGCATTTTATACATAGACCGTGTAAAACCATTGAGTAAAAAACTGATGGAAAGTAAGCTGAAACAAGTGCTGAAAGGAAACGTTACCACGCCCTATAAAATGAAATTCAAGAACTAA
PROTEIN sequence
Length: 195
MKLPVYGYGNNVLKMTADKVEQDYPGLDTLIADMWETMENAQGCGLAAPQIGKPLQLFVADSKILFDNMGETERKDVFTEGDTGIREVFINTEIISLSENKWEETEGCLSLPFLSGKVVRSWSVEVQYQNQHFETIQKKFSGMTARVILHEYDHTQGILYIDRVKPLSKKLMESKLKQVLKGNVTTPYKMKFKN*