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scnpilot_p_inoc_scaffold_302_25

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: 23163..24017

Top 3 Functional Annotations

Value Algorithm Source
tetracycline resistance element mobilization regulatory protein RteC n=1 Tax=Empedobacter brevis RepID=UPI00036FF696 similarity UNIREF
DB: UNIREF100
  • Identity: 79.7
  • Coverage: 271.0
  • Bit_score: 446
  • Evalue 2.50e-122
  • rbh
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KFF20011.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 272.0
  • Bit_score: 511
  • Evalue 6.80e-142
tetracycline resistance element mobilization regulatory protein RteC similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 272.0
  • Bit_score: 435
  • Evalue 1.60e-119

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Taxonomy

Chryseobacterium sp. JM1 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 855
ATGCATTGGTCTGTTTTTTCACATTTAATTAAAGCTATGGATGTAACCTATAATAAAATACTACATAAACTTGAACACGACATTCAGGATATAGAAATCGAATCGGAACACTCTATACAACGTATTGAAATCATTATAGAACTTATCGTTAAATCTTTATCTGAAGTAAAAGAGTACGTACTGAAGAACGGGTTTAAGAATACTGATGCCGAAATTCATTTCTTCAAACATCAGAAGCCAGCCATTGTCGCAAAACTCATTTACTACAATGCCATTTATAAAATCGAAACAAAAAAGCCTAATGAAACAAAGGCAATCAGGAAACATTTCAACGAAGAGTTGAGAAAGCTCAAAAAGTATTTTGACAATAATATTGAATTTTATAAATACTACCGCACCAATAATACATTTATTGATGAGAAGCTGTTTTTGCGTGGCAAACACGACATAAAATTGAGCCTGGATACGGTGTATTTTGAAACCGACCATAGGTTTTCCACTTCCCACGATTATAAGGCAGCAAAGATTATCGCCAATGACCTGATACAAGTCTATATTGAAGACCAACTGAATAACAACAACCAGCGGAAATCACGCTACCACGCTTCGTTAAACTGGGCAGAGAGCAAAACAGCATTAACCGAATTGATTTACGCACTGCATTCGCAGGGTGCTTTTGGCAATGCCGATATAATAGCCATCGCCAAAACATTTGAAAATACCTTCAATATCAGTTTGGGCGATTTCTATCATACGTTTATGGAACTTAAATCCCGGAAAATAAACCGTACCAAATTTCTGGACAGTTTGCGTGATGCCTTGATTAGGAAAATGGACGAAGAGGACGAAAAATAG
PROTEIN sequence
Length: 285
MHWSVFSHLIKAMDVTYNKILHKLEHDIQDIEIESEHSIQRIEIIIELIVKSLSEVKEYVLKNGFKNTDAEIHFFKHQKPAIVAKLIYYNAIYKIETKKPNETKAIRKHFNEELRKLKKYFDNNIEFYKYYRTNNTFIDEKLFLRGKHDIKLSLDTVYFETDHRFSTSHDYKAAKIIANDLIQVYIEDQLNNNNQRKSRYHASLNWAESKTALTELIYALHSQGAFGNADIIAIAKTFENTFNISLGDFYHTFMELKSRKINRTKFLDSLRDALIRKMDEEDEK*