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scnpilot_p_inoc_scaffold_432_47

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(53893..54720)

Top 3 Functional Annotations

Value Algorithm Source
tetracycline resistance element mobilization regulatory protein RteC n=1 Tax=Empedobacter brevis RepID=UPI00036FF696 similarity UNIREF
DB: UNIREF100
  • Identity: 74.8
  • Coverage: 274.0
  • Bit_score: 415
  • Evalue 6.00e-113
Tetracycline regulation of excision, RteC {ECO:0000313|EMBL:KGO11338.1}; TaxID=172045 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.9
  • Coverage: 276.0
  • Bit_score: 425
  • Evalue 6.20e-116
tetracycline resistance element mobilization regulatory protein RteC similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 272.0
  • Bit_score: 419
  • Evalue 8.90e-115

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Taxonomy

Elizabethkingia miricola → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 828
ATGGATAAATTTTATAACGAAACGTTGAATAATCTGGAAGCCGCAATCAAAGAATTAGAAACTGAAACGGATTGCTCCATACAACAGATTGAAGTGATAATAAAACTTATCATCAAATGCCTGTCTAATGTGAAAGAATATGTATTGAACAGAGGATTTAAAAATGTAGAGGAAGAAATTCGTTTTTTCAAGCATCAAAAGCCCGCTATTGTTTCAAAGCTCATCTATTATAACGCTATCTATAAAATCGAAACAAAGAAACCTTATGGCGGTAAGGCAGTGAAGAAATACTATAATGATGAATTGGAAAAACTCAAAAGATATTTTGACAATAACCTCGAATTTTATAAATATTACAGAACCAATAATACTTTTATAGATGATAAGCTATTTGTACGGGGAAAGTATGACATTAAACTAAGTCTGGACACCTATTATTTTGAAGCGGACCATAATTTTTCCACTTCCCACGATTATAAGGCTGCAAAAATCATCGCCAATGACCTGATACAAGTATATCTTGAAGACCAGCTTCACAGCCCGATACATAAAAGCAAATCAATAGAATTACCTAACTTAAATTGGCGAGGCAGTAAAACTGCATTGACAGAATTGATATATGCCCTTCACGCTCAGGGTGTATTTGACAATACGGATATTAAAGTAATCGCCAAAACATTTGAAAGCATCTTTAATGTTGATTTAGGCGACTTTTACCATACATTTATGGAGCTGAAAGCCCGAAAAATAAACCGGACGAAGTTTCTTGACAGCCTGCGTGATGCGCTGATAAAACGGATGGATGAGCTGGAAGAAGATGAATATTAG
PROTEIN sequence
Length: 276
MDKFYNETLNNLEAAIKELETETDCSIQQIEVIIKLIIKCLSNVKEYVLNRGFKNVEEEIRFFKHQKPAIVSKLIYYNAIYKIETKKPYGGKAVKKYYNDELEKLKRYFDNNLEFYKYYRTNNTFIDDKLFVRGKYDIKLSLDTYYFEADHNFSTSHDYKAAKIIANDLIQVYLEDQLHSPIHKSKSIELPNLNWRGSKTALTELIYALHAQGVFDNTDIKVIAKTFESIFNVDLGDFYHTFMELKARKINRTKFLDSLRDALIKRMDELEEDEY*