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scnpilot_p_inoc_scaffold_315_49

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(61314..63008)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagac similarity UNIPROT
DB: UniProtKB
  • Identity: 42.7
  • Coverage: 531.0
  • Bit_score: 366
  • Evalue 9.10e-98
Pseudouridine synthase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PP04_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 531.0
  • Bit_score: 366
  • Evalue 6.50e-98
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 42.7
  • Coverage: 531.0
  • Bit_score: 366
  • Evalue 1.80e-98

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1695
ATGTCTAAAGATAAAAAATCATTCTTTGAAGAAAAATTCGGCTTTAAGAAGAATCCCAAAGTGGAAAAGGCTAAAGACGCGAGAAAGGAAAAGCAACTGAAAAAGCAATACGGCGACGGGGACGATAAATGGGAATACCAGGACCAGTTCGATAAAGCCAGGGACAGGAAAAAGCTGTTTGCAAAGGACGGGGGAGCAGACAGGAAAGATAAAAGGAATTACCGGGATAAGGATGGCGCATCCCCTGACCGTAAAGACCGGAAACCCTTCAGCAAAGAAGGGAGAGACGCCGAGCGTAAGGATAAAAAGCCTTTTAACGGCAGGTATGCCGGGTCGCCCGACCGTAAAGACCGGAAACCCTTCAGCAAAGAAGGGAGAGATGCCGACCGTAAGGATAAAAAGCCTTTTAATGACAGGTATGCCGGGTCGCCCGACCGTAAAGACCGGAAACCGTTTGACAAAGAAGGGAGAGACTCAGACCGTAAAGGCAGGAAGCCCTTTGGTGACAGGGACGGCGATACGGGAAGGAGAGCCTACGGCTCTTCCGGATCCGCAGACGGGCAGGATAAAAGACGCTCCAGGGATAAGGACGGCGACAGGAGATCCGATAAGAACCTGCCGGCTAAAAAAACGGCTTCCCGTATTTTTGAAAAGGATAAGCCGGAGCGTGAGGTCTTTTATACCGAAGAGGACCGGAAAAGACTATTCGGGGAAGAAGCATTCAAGGACCGCGTGCTGAAAGAGCTGAAAGACGAGATCGACCAGGATTTCGATGCCGTAAAAAAGGAAAAGGCGCAGAAAAAGAAAGAAGAAAGGAGAGGACGTAAGGAAAAGAATAAGGAAAGTGAAGATTACGGGCTGACCAAATACATTGATGATGAGTCGGACTACGAGATCGCATACGAAGCGGCCGGCGGCAAAAAATGGCAGGTAGAGAACGCCATGGATAATAACTACAGGAAGCCTGTGGGCGAGGAAGAGGAAATGCCTCTGAATAAATACATCGCTTACTGTGGGGTCTGCTCTAGGAGAGACGCGGTACCTTTGATAAAATCCGGTAAAATAAGCGTAGAGGGCGAGGTCTGTAAGGAGCCGGGCTTTAAGGTCACCAGGGATACAAATGTTACGATGGACGGTAAAAAGCTCAGCATACAGAAAAATATTGTGTATGTGCTGATGAACAAGCCTAAAGGATATATTACCACAACGGATGATCCTAAGGACAGGAAAACGGTAATGGACCTGGTGAGCAACCATATAGAAGAACGGATCTTCCCGGTAGGCCGCCTGGACAGGAACACGACCGGCCTGCTGCTGCTGACCAATGACGGAGATCTGGCGCAACAACTGGCACATCCCAAATACGAGATCAGGAAGATCTACCACGTGGTGCTGGACAAGAACCTGTCCAAGACGGACTTTGATAAGATCGCCGCGGGTGTGGAGCTGGAAGACGGTATCGCTCCGGTAGATCATATTGCTTACCTGGAAAAAAAGAACGAGATAGGCATAGAGATACACAGCGGTAAGAACAGGATCGTGAGAAGGATCTTTGAATCCTGCGGTTATGTGGTGGAAAAGCTGGACAGGGTCATGTACGCCGGCCTGACCAAGAAGAACATACCGAGAGGTAAATGGAGACTGCTTTCCAAGCAGGAGATCATTAACCTTAAGCACCTGAACAAGGGAAAATAA
PROTEIN sequence
Length: 565
MSKDKKSFFEEKFGFKKNPKVEKAKDARKEKQLKKQYGDGDDKWEYQDQFDKARDRKKLFAKDGGADRKDKRNYRDKDGASPDRKDRKPFSKEGRDAERKDKKPFNGRYAGSPDRKDRKPFSKEGRDADRKDKKPFNDRYAGSPDRKDRKPFDKEGRDSDRKGRKPFGDRDGDTGRRAYGSSGSADGQDKRRSRDKDGDRRSDKNLPAKKTASRIFEKDKPEREVFYTEEDRKRLFGEEAFKDRVLKELKDEIDQDFDAVKKEKAQKKKEERRGRKEKNKESEDYGLTKYIDDESDYEIAYEAAGGKKWQVENAMDNNYRKPVGEEEEMPLNKYIAYCGVCSRRDAVPLIKSGKISVEGEVCKEPGFKVTRDTNVTMDGKKLSIQKNIVYVLMNKPKGYITTTDDPKDRKTVMDLVSNHIEERIFPVGRLDRNTTGLLLLTNDGDLAQQLAHPKYEIRKIYHVVLDKNLSKTDFDKIAAGVELEDGIAPVDHIAYLEKKNEIGIEIHSGKNRIVRRIFESCGYVVEKLDRVMYAGLTKKNIPRGKWRLLSKQEIINLKHLNKGK*