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scnpilot_p_inoc_scaffold_498_16

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(17876..18379)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TLD8_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 55.4
  • Coverage: 166.0
  • Bit_score: 184
  • Evalue 1.00e-43
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 55.4
  • Coverage: 166.0
  • Bit_score: 184
  • Evalue 2.90e-44
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEW03011.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 55.4
  • Coverage: 166.0
  • Bit_score: 184
  • Evalue 1.50e-43

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 504
ATGAGTAGTGTATCATTTAACAGTTTAATCGAATCCAATTCCACCTATCTACAACCATTTGCCATTTCCCTGACACAAGATGCGGATGATGCAAAAGACCTGGTACAGGAAACTCTTTACAAAGCTATCGTTTATAAAGATAAATTTCAAGAAGGCACCAATGTCAAAGCATGGCTTTACACCATTATGCGCAATATCTTCATCAATAATTACAGGCGGCTGCAGAAATTCAGGGGCGTATCCTCAGATACTCCGCAGGATTTTTACCTGGTGAAGCAGCAGAAGTTTGCGACCAACGGTGGAGTCAGCAATATCAACCTCGCTGCCATTAAGAAAGCCATTGACGATCTGCCCGAAATACTCCGTATCTCCTTTGAGCTGCACTACCTGGGCTACAAGTACCAGGAAATTGCCGAAACGCTCAACGAGCCCCTGGGTACTATCAAAAGCAGGATTCACTTTGCCAGGAAAACCCTTACTGAAAATCTGAAGCATTTAAGATAG
PROTEIN sequence
Length: 168
MSSVSFNSLIESNSTYLQPFAISLTQDADDAKDLVQETLYKAIVYKDKFQEGTNVKAWLYTIMRNIFINNYRRLQKFRGVSSDTPQDFYLVKQQKFATNGGVSNINLAAIKKAIDDLPEILRISFELHYLGYKYQEIAETLNEPLGTIKSRIHFARKTLTENLKHLR*