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scnpilot_p_inoc_scaffold_609_24

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(26922..28712)

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GRK7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 575.0
  • Bit_score: 709
  • Evalue 2.50e-201
  • rbh
Type IV secretion system protein VirD4 {ECO:0000313|EMBL:CCH56535.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3 similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 575.0
  • Bit_score: 709
  • Evalue 3.60e-201
TRAG family protein similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 608.0
  • Bit_score: 488
  • Evalue 2.60e-135

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Taxonomy

Fibrisoma limi → Fibrisoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1791
ATGAGCCATGAAAAAAATCTGAAAAGCTTGTTTAAGGTTACGCCGCAAGAAATCAAAGAGCTGTTTCAGATCCAGCGAAGCAAAAAATCCAAATCACGGATTATCGTGTTTTTGGTAGGTGTCATTTTTACACCCATTACCCTTATCGGGGCATTAGCGGGATATATCCGGGCGTATAAACGCTTTATGTTCCCGAAAAAAATGTTCCCGGTCTTTTCCCCGATGCTGCCCATCGTCCGGGTGGCGATGATCTCGGGAGCTGTCCTGATCTGGATCGCTCTTTTCCTAGTAACCTTCATTATTTTTAAAGTTCTGGGTATTGATTTCCAGAGTGTTATTTATCTGCTTTATTATTTAGGCGTCAACCTTATCCTGTCGCTGATTGTCTTTGCTTTTTTCAACCGCTGGCGGGTGGGTTATCACAATTACCTGATTGAAGGGCGAAAGTTCGGGTCCGCCCGCCTGGCCCGGGAGGAAGAGCTGGGGCCATTCCGGGGGAAAGAGGGTATTTATATCGGCGGTGGTTATACGTTTTCTGACCGTGGGCATATCCTGACCGTTGCCGGAACACGTGGCGGGAAAGGCACAAACCTGATTATCCCTAACCTTTTAGGGTTGGGTAACTATCAGGGCTCATGGGTCGTCATCGACCCGAAAGGTGAAAATGCCGCCATTACCGCGCGGCGGCAATGGGAGCTGGGACAAAAGGTGGTGATCCTGAATCCCTGGCATTTGCACCCGGATGCGCTGGGCCGCCCGATGTCCTATAATCCTTTGGATATTCTTGCGGACAAGACAAGTATCAACCTGATCGACGATGTGCAGATCATCGCGGAAATGATTATTCCCGTTGATAAGAACGATAAGGATAAATTTTTTACCGATACGGCACGTGCTATTTTTACAGGTTTGATATTATACCTTGTTGTTACTCAACCTAAAGAAGACTGTACTCTGGCAACGATCTGGAACTGGGTGCGCTTTGCGCCGAATGAGTGGGATGAGCTTATTGCCGATATGTCGGCTGTCGATGATACAATCAACGGCAGTATTATCCGAAATACGGCAAATGAGATTTTGGGGCTTATGAAGTCCGATAAAACCTATGCCAGCGTGATGGCGACCATATTGCAAAACACGGATTTTTTAAAATCCTCTGCCTTGCAGCAATCGTTGCGATCTGAATTTGACCCGAAGGAACTCACCAACGGGAATGTGACGCTCTATATCATCATTCCTGCGGACAAGATGCAAAGCCATGCGCGGTGGCTGCGTCTGGTGACGACTACGGCCATGCGTGCCGTGGTGCGAAATCCCAATAAGCGTGTGACGTTCCTGCTCGATGAATTTGCCGCATTGGGTTATATCAGCGAGATCGAAGTGGCAATGGGCGCCTATGCAGGGTTTAATTTGACGGTCTGGCCGATCCTGCAATCCCTTTCACAATTGAAAAAATACTATTCGGAGTCTTGGGAAACCTTTATCGGCAATACGGCGGTCAAACATTACTTTTCTATCGCGGACCATTTTACGGCAGATTATGTGAGCAAGACAATGGGGCAAGCCTCGCACGTTATTTACCAACGTGGCGCATGGGGAATCCAGAACCCGCAGGCCACGAAACGCCAGTTGTTTACGCCGGACGAGATCATGCAGGGGTCTGTGGATAATATTTTTGCCTTTATCGGAGGCAAGCATCCGACCTATTTCAGGAAAGTGCCGTACTATGAAATGCCGGTATTTATCGTTGATGGCAAACCTCTTTATGATGATAACCCTTATTTTAAATAG
PROTEIN sequence
Length: 597
MSHEKNLKSLFKVTPQEIKELFQIQRSKKSKSRIIVFLVGVIFTPITLIGALAGYIRAYKRFMFPKKMFPVFSPMLPIVRVAMISGAVLIWIALFLVTFIIFKVLGIDFQSVIYLLYYLGVNLILSLIVFAFFNRWRVGYHNYLIEGRKFGSARLAREEELGPFRGKEGIYIGGGYTFSDRGHILTVAGTRGGKGTNLIIPNLLGLGNYQGSWVVIDPKGENAAITARRQWELGQKVVILNPWHLHPDALGRPMSYNPLDILADKTSINLIDDVQIIAEMIIPVDKNDKDKFFTDTARAIFTGLILYLVVTQPKEDCTLATIWNWVRFAPNEWDELIADMSAVDDTINGSIIRNTANEILGLMKSDKTYASVMATILQNTDFLKSSALQQSLRSEFDPKELTNGNVTLYIIIPADKMQSHARWLRLVTTTAMRAVVRNPNKRVTFLLDEFAALGYISEIEVAMGAYAGFNLTVWPILQSLSQLKKYYSESWETFIGNTAVKHYFSIADHFTADYVSKTMGQASHVIYQRGAWGIQNPQATKRQLFTPDEIMQGSVDNIFAFIGGKHPTYFRKVPYYEMPVFIVDGKPLYDDNPYFK*