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scnpilot_p_inoc_scaffold_992_12

Organism: SCNpilot_P_inoc_Sphingobacteriales_44_17

near complete RP 47 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38
Location: comp(7274..7870)

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Flavobacterium sp. F52 RepID=J0RTK8_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 198.0
  • Bit_score: 308
  • Evalue 5.70e-81
  • rbh
HTH-type transcriptional repressor ComR {ECO:0000313|EMBL:CEJ72055.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.6
  • Coverage: 196.0
  • Bit_score: 331
  • Evalue 8.70e-88
Transcriptional regulator, TetR family protein similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 198.0
  • Bit_score: 252
  • Evalue 1.40e-64

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Taxonomy

Chryseobacterium oranimense → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 597
ATGAAAATGTCAAAATCAGAAAATACAAAACAGTTTATTGTTGAAAAAACCGCACCTGTATTCAATACAAAAGGATATGCCGGTACTTCAATGAATGATATTATGAGTGCGACAGGTCTTTCAAAAGGTTGTATATATGGCAACTTTGAGAATAAAGATGAAGTTGCTTTGGCTGCTTTCGACTACAACCACAACAAAGTAAACGAGCATATGAAAGTACGGATATTGGCAACCGATAATTCCATTGAAAGATTATTGGTCTATCCGAATACTTACAAGAATTATTTCAGGTATCCTTATTTACTGGCAGGTTGCCCCATCTTAAATACATCAACAGAGGCAGATGACACCCATCCGAAGTTGCGAGAACGGGCAGAAAAAGCACTTGATTTCTGGAAAACATCTATAGAAAACCAAATTAAGCGGGGTATTACAAGAAAAGAAATTAAGGATGATACTGACCCAACGGAAGTTGCGGTAGTAATGATTTCAATGATTGAAGGAGCATTTATGCAGGCAAAGGTTACAAACAGAACAAAAGAGCTGAAAATAGCAATGGAGTTTTTGGAAAAAATGATTACAGCATTAAAAGCATAA
PROTEIN sequence
Length: 199
MKMSKSENTKQFIVEKTAPVFNTKGYAGTSMNDIMSATGLSKGCIYGNFENKDEVALAAFDYNHNKVNEHMKVRILATDNSIERLLVYPNTYKNYFRYPYLLAGCPILNTSTEADDTHPKLRERAEKALDFWKTSIENQIKRGITRKEIKDDTDPTEVAVVMISMIEGAFMQAKVTNRTKELKIAMEFLEKMITALKA*