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scnpilot_p_inoc_scaffold_21

Search features with annotation key words

Displaying items 211-240 of 379 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_21_211
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

271609..273447
DNA (1839bp) protein (613aa)
DNA topoisomerase type IIA subunit B region 2 domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T618_PALPW rbh
DNA topoisomerase type IIia subunit b region 2 domain-containing protein
DNA topoisomerase type IIA subunit B region 2 domain protein {ECO:0000313|EMBL:ADQ80162.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.
scnpilot_p_inoc_scaffold_21_212
Bacteroides sp. CAG:661, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

273450..273881
DNA (432bp) protein (144aa)
tRNA-specific adenosine deaminase {ECO:0000256|HAMAP-Rule:MF_00972}; EC=3.5.4.33 {ECO:0000256|HAMAP-Rule:MF_00972};; TaxID=1262746 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bactero
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Bacteroides sp. CAG:661 RepID=R5S580_9BACE
cmp/dcmp deaminase zinc-binding protein
scnpilot_p_inoc_scaffold_21_213
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

273891..277142
DNA (3252bp) protein (1084aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.
UvrD/REP helicase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T594_PALPW rbh
uvrd/rep helicase
scnpilot_p_inoc_scaffold_21_214
Bacteroides sp. CAG:462, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

277239..277886
DNA (648bp) protein (216aa)
Phosphoglycolate phosphatase bacterial n=1 Tax=Bacteroides sp. CAG:462 RepID=R7D149_9BACE
Phosphoglycolate phosphatase bacterial {ECO:0000313|EMBL:CDD84289.1}; TaxID=1262740 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;"
phosphoglycolate phosphatase
scnpilot_p_inoc_scaffold_21_215
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(278046..279041)
DNA (996bp) protein (332aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {EC
Tryptophan--tRNA ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T698_PALPW rbh
scnpilot_p_inoc_scaffold_21_216
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(279053..279508)
DNA (456bp) protein (152aa)
Transcriptional regulator, AsnC family n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T697_PALPW
ArsR family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=CG_Paludi_01
ArsR family transcriptional regulator
scnpilot_p_inoc_scaffold_21_217
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(279573..280433)
DNA (861bp) protein (287aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T696_PALPW
peptidylprolyl isomerase fkbp-type Tax=CG_Paludi_01
peptidylprolyl isomerase fkbp-type
scnpilot_p_inoc_scaffold_21_218
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(280452..280931)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T695_PALPW
hypothetical protein Tax=CG_Paludi_01
hypothetical protein
scnpilot_p_inoc_scaffold_21_219
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(280945..281718)
DNA (774bp) protein (258aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
peptidyl-prolyl isomerase (EC:5.2.1.8) Tax=CG_Paludi_01
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T694_PALPW
scnpilot_p_inoc_scaffold_21_220
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(281743..282327)
DNA (585bp) protein (195aa)
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bactero
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T693_PALPW
scnpilot_p_inoc_scaffold_21_221
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(282403..283956)
DNA (1554bp) protein (518aa)
Putative uncharacterized protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T691_PALPW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ80235.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
scnpilot_p_inoc_scaffold_21_222
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

284173..285171
DNA (999bp) protein (333aa)
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
Aspartate-semialdehyde dehydrogenase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T690_PALPW rbh
scnpilot_p_inoc_scaffold_21_223
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(285429..286190)
DNA (762bp) protein (254aa)
carbohydrate esterase family 12 protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D9F5
Carbohydrate esterase {ECO:0000313|EMBL:KGO86134.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivul
carbohydrate esterase
scnpilot_p_inoc_scaffold_21_224
Capnocytophaga sp. oral taxon 329, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

286312..287265
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Psychroflexus tropicus RepID=UPI00037A909A
Uncharacterized protein {ECO:0000313|EMBL:KHE69066.1}; TaxID=706436 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp.
scnpilot_p_inoc_scaffold_21_225
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(287308..290184)
DNA (2877bp) protein (959aa)
hypothetical protein Tax=GWB2_Bacteroidetes_41_8_curated
Putative uncharacterized protein id=4203263 bin=GWF2_Bacteroidetes_41_9 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes rbh
hypothetical protein
scnpilot_p_inoc_scaffold_21_226
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(290198..290578)
DNA (381bp) protein (127aa)
Putative uncharacterized protein id=4724920 bin=GWC2_Bacteroidetes_40_22 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
Putative uncharacterized protein Tax=GWA2_Bacteroidetes_40_15_curated
scnpilot_p_inoc_scaffold_21_227
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

290685..292823
DNA (2139bp) protein (713aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=694427
Polyribonucleotide nucleotidyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T510_PALPW rbh
scnpilot_p_inoc_scaffold_21_228
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

293033..293842
DNA (810bp) protein (270aa)
Putative HTH-type transcriptional regulator in mcrB 3'region n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG99_9BACT
AraC family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
putative transcriptional regulator
scnpilot_p_inoc_scaffold_21_229
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

293936..295162
DNA (1227bp) protein (409aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6AFV7_9PORP rbh
outer membrane lipoprotein
Membrane protein {ECO:0000313|EMBL:KIO45840.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroides.;" source="Sanguibacteroides justeseni
scnpilot_p_inoc_scaffold_21_230
BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

Not on your lists

295183..295935
DNA (753bp) protein (251aa)
Tax=BJP_IG2069_Bacteroidetes_43_11
scnpilot_p_inoc_scaffold_21_231
unknown

Not on your lists

295939..297030
DNA (1092bp) protein (364aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_21_232
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

297128..297583
DNA (456bp) protein (152aa)
DUF1801 domain-containing protein n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2CY45_9BACT
DUF1801 domain-containing protein {ECO:0000313|EMBL:EOZ91509.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
hypothetical protein
scnpilot_p_inoc_scaffold_21_233
RBG_19FT_COMBO_Bacteroidetes_42_10_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(297584..300304)
DNA (2721bp) protein (907aa)
Signal transduction histidine kinase n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N9C1_9BURK
putative multi-sensor hybrid histidine kinase Tax=RBG_19FT_COMBO_Bacteroidetes_42_10_curated
signal transduction histidine kinase
scnpilot_p_inoc_scaffold_21_234
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

300433..301860
DNA (1428bp) protein (476aa)
d-alanyl-d-alaninecarboxypeptidase/d-alanyl-d-alanine-endopeptidase (EC:3.4.16.4)
D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:ADQ79806.1}; EC=3.4.16.4 {ECO:0000313|EMBL:ADQ79806.1};; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacte
D-alanyl-D-alaninecarboxypeptidase/ D-alanyl-D-alanine-endopeptidase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T512_PALPW rbh
scnpilot_p_inoc_scaffold_21_235
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

301950..303398
DNA (1449bp) protein (483aa)
tryptophanase (EC:4.1.99.1)
Tryptophanase {ECO:0000313|EMBL:ADQ79967.1}; EC=4.1.99.1 {ECO:0000313|EMBL:ADQ79967.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;"
Tryptophanase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5H3_PALPW rbh
scnpilot_p_inoc_scaffold_21_236
Chlorobaculum parvum, Chlorobaculum, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

303510..304319
DNA (810bp) protein (270aa)
Zinc transporter ZupT n=1 Tax=Chlorobaculum parvum (strain NCIB 8327) RepID=ZUPT_CHLP8 rbh
zinc transporter ZupT
Zinc transporter ZupT {ECO:0000255|HAMAP-Rule:MF_00548}; TaxID=517417 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobaculum.;" source="Chlorobaculum parvum (strain NCIB 83
scnpilot_p_inoc_scaffold_21_237
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

304333..305265
DNA (933bp) protein (311aa)
methionine synthase (EC:2.1.1.13)
methionine synthase (EC:2.1.1.13) Tax=CG_Paludi_01
Methionine synthase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5X7_PALPW rbh
scnpilot_p_inoc_scaffold_21_238
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

305313..305987
DNA (675bp) protein (225aa)
tRNA (guanine37-n(1)-) methyltransferase (EC:2.1.1.31); K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] Tax=CG_Paludi_01
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5X8_PALPW rbh
tRNA (guanine37-n(1)-) methyltransferase
scnpilot_p_inoc_scaffold_21_239
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

306017..306991
DNA (975bp) protein (325aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_0015
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5Y2_PALPW rbh
scnpilot_p_inoc_scaffold_21_240
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

307087..308226
DNA (1140bp) protein (380aa)
DNA polymerase iii, beta subunit (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] Tax=CG_Paludi_01
DNA polymerase III subunit beta (EC:2.7.7.7)
DNA polymerase III subunit beta n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T5E0_PALPW rbh
Displaying items 211-240 of 379 in total

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