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scnpilot_p_inoc_scaffold_310

Search features with annotation key words

Displaying items 61-90 of 114 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_310_61
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(48347..49420)
DNA (1074bp) protein (358aa)
mannose-1-phosphate guanylyltransferase (gdp) (EC:2.7.7.13 2.7.7.22); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] Tax=CG_Paludi_01
mannose-1-phosphate guanylyltransferase (gdp) (EC:2.7.7.13 2.7.7.22)
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T572_PALPW rbh
scnpilot_p_inoc_scaffold_310_62
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49566..53858)
DNA (4293bp) protein (1431aa)
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T571_PALPW rbh
scnpilot_p_inoc_scaffold_310_63
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(53882..57694)
DNA (3813bp) protein (1271aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T570_PALPW rbh
scnpilot_p_inoc_scaffold_310_64
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(57836..58213)
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T569_PALPW
LSU ribosomal protein l12p; K02935 large subunit ribosomal protein L7/L12 Tax=CG_Paludi_01
50S ribosomal protein L12
scnpilot_p_inoc_scaffold_310_65
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(58258..58779)
DNA (522bp) protein (174aa)
50S ribosomal protein L10 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T568_PALPW
LSU ribosomal protein l10p; K02864 large subunit ribosomal protein L10 Tax=CG_Paludi_01
50S ribosomal protein L10
scnpilot_p_inoc_scaffold_310_66
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(58792..59487)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T567_PALPW rbh
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propioni
scnpilot_p_inoc_scaffold_310_67
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(59502..59945)
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T566_PALPW
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.
scnpilot_p_inoc_scaffold_310_68
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(60001..60549)
DNA (549bp) protein (183aa)
Transcription termination/antitermination protein NusG n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T565_PALPW
transcription antitermination protein nusg
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porp
scnpilot_p_inoc_scaffold_310_69
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(60575..60766)
DNA (192bp) protein (64aa)
Protein translocase subunit SecE n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T564_PALPW
preprotein translocase, sece subunit; K03073 preprotein translocase subunit SecE Tax=CG_Paludi_01
preprotein translocase subunit SecE
scnpilot_p_inoc_scaffold_310_70
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(60922..62109)
DNA (1188bp) protein (396aa)
Elongation factor Tu n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T563_PALPW rbh
translation elongation factor 1a (ef-1a/ef-tu) rbh
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacte
scnpilot_p_inoc_scaffold_310_71
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(62703..63002)
DNA (300bp) protein (100aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T562_PALPW
sigma 54 modulation protein/ribosomal protein s30ea
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:ADQ79856.1}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source
scnpilot_p_inoc_scaffold_310_72
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63017..63898)
DNA (882bp) protein (294aa)
Tyrosine recombinase XerC n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T561_PALPW rbh
integrase family protein
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propion
scnpilot_p_inoc_scaffold_310_73
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(63981..64172)
DNA (192bp) protein (64aa)
30S ribosomal protein S21 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T560_PALPW
SSU ribosomal protein s21p; K02970 small subunit ribosomal protein S21 Tax=CG_Paludi_01
30S ribosomal protein s21
scnpilot_p_inoc_scaffold_310_74
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

64383..65516
DNA (1134bp) protein (378aa)
carboxynorspermidine decarboxylase (EC:4.1.1.-)
Carboxynorspermidine decarboxylase {ECO:0000313|EMBL:ADQ80952.1}; EC=4.1.1.- {ECO:0000313|EMBL:ADQ80952.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadace
Carboxynorspermidine decarboxylase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8A8_PALPW rbh
scnpilot_p_inoc_scaffold_310_75
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(65517..67418)
DNA (1902bp) protein (634aa)
ATP-dependent DNA helicase recq (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:ADQ80953.1}; EC=3.6.1.- {ECO:0000313|EMBL:ADQ80953.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae;
ATP-dependent DNA helicase RecQ n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8A9_PALPW rbh
scnpilot_p_inoc_scaffold_310_76
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(67420..69489)
DNA (2070bp) protein (690aa)
amp-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] Tax=CG_Paludi_01
AMP-dependent synthetase and ligase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T741_PALPW rbh
amp-dependent synthetase and ligase
scnpilot_p_inoc_scaffold_310_77
unknown

Not on your lists

70461..70580
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_310_78
unknown

Not on your lists

70525..71637
DNA (1113bp) protein (371aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_310_79
unknown

Not on your lists

71591..72037
DNA (447bp) protein (149aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_310_80
CG_Paludi_01, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(72292..72471)
DNA (180bp) protein (60aa)
hypothetical protein Tax=CG_Paludi_01
2Fe-2S iron-sulfur cluster-binding domain protein id=2120351 bin=GWE2_Bacteroidetes_40_15 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_40_15 organism_group=Bacteroidetes organism_desc=Good +
nitrite reductase-like protein
scnpilot_p_inoc_scaffold_310_81
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

72544..74250
DNA (1707bp) protein (569aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8B6_PALPW rbh
peptidase s8 and s53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ADQ80960.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludib
scnpilot_p_inoc_scaffold_310_82
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

74255..75505
DNA (1251bp) protein (417aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00195506};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyrom
Exonuclease VII, large subunit n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T8B7_PALPW rbh
exonuclease vii, large subunit
scnpilot_p_inoc_scaffold_310_83
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

75502..76470
DNA (969bp) protein (323aa)
Glycosyltransferase 28 domain protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6M9_PALPW rbh
glycosyltransferase 28 domain-containing protein
Glycosyltransferase 28 domain protein {ECO:0000313|EMBL:ADQ80373.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" s
scnpilot_p_inoc_scaffold_310_84
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(76485..77456)
DNA (972bp) protein (324aa)
Dentin sialophosphoprotein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JDI3_9BACT
hypothetical protein Tax=GWB2_Bacteroidetes_41_8_curated
hypothetical protein
scnpilot_p_inoc_scaffold_310_85
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

77569..78090
DNA (522bp) protein (174aa)
Colicin V production protein n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6N2_PALPW
colicin v production protein
Colicin V production protein {ECO:0000313|EMBL:ADQ80376.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Pa
scnpilot_p_inoc_scaffold_310_86
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

78056..78631
DNA (576bp) protein (192aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
RNAse hii (EC:3.1.26.4)
Ribonuclease HII n=2 Tax=Bacteroides RepID=A5ZKN1_9BACE
scnpilot_p_inoc_scaffold_310_87
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(78628..80904)
DNA (2277bp) protein (759aa)
Surface antigen (D15) n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6N4_PALPW rbh
surface antigen (d15)
Surface antigen (D15) {ECO:0000313|EMBL:ADQ80378.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibac
scnpilot_p_inoc_scaffold_310_88
Bacteroides coprophilus CAG:333, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

81010..81762
DNA (753bp) protein (251aa)
RNA methyltransferase TrmH family n=1 Tax=Bacteroides coprophilus CAG:333 RepID=R6SC71_9BACE
tRNA/rRNA methyltransferase (spou)
RNA methyltransferase TrmH family {ECO:0000313|EMBL:CDC58788.1}; TaxID=1263041 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" sourc
scnpilot_p_inoc_scaffold_310_89
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(81759..84218)
DNA (2460bp) protein (820aa)
TonB-dependent receptor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6N6_PALPW rbh
tonb-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ADQ80380.1}; Flags: Precursor;; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludib
scnpilot_p_inoc_scaffold_310_90
Paludibacter propionicigenes, Paludibacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(84342..85787)
DNA (1446bp) protein (482aa)
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibact
Pyruvate kinase n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6N7_PALPW rbh
Displaying items 61-90 of 114 in total

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