ggKbase home page

scnpilot_p_inoc_scaffold_1871

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1871_1
Bacteroides sp. D2, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

239..2779
DNA (2541bp) protein (847aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D2 RepID=E5CDU5_9BACE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFS33260.1}; TaxID=556259 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D2.;"
scnpilot_p_inoc_scaffold_1871_2
unknown

Not on your lists

3017..3832
DNA (816bp) protein (272aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1871_3
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4154..5314)
DNA (1161bp) protein (387aa)
Transposase id=3840733 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
Putative transposase Tax=GWA2_Bacteroidetes_32_17_curated
Mobile element protein
scnpilot_p_inoc_scaffold_1871_4
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5314..6216)
DNA (903bp) protein (301aa)
Putative integrase/recombinase y4qK n=1 Tax=Bacteroidales bacterium CF RepID=U5Q820_9BACT rbh
hypothetical protein
Putative integrase/recombinase y4qK {ECO:0000313|EMBL:AGY54598.1}; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales.;" source="Bacteroidales bacterium CF.;"
scnpilot_p_inoc_scaffold_1871_5
Porphyromonas cangingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6545..7057
DNA (513bp) protein (171aa)
Putative uncharacterized protein id=4927550 bin=GWC2_Bacteroidetes_46_850 species=Tetragenococcus halophilus genus=Tetragenococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN81700.1}; TaxID=36874 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas cangingivali
hypothetical protein
scnpilot_p_inoc_scaffold_1871_6
BJP_08E140C01_Bacteroidetes_41_49, Bacteroidetes, Bacteria

Not on your lists

7126..7941
DNA (816bp) protein (272aa)
Putative uncharacterized protein id=4927551 bin=GWC2_Bacteroidetes_46_850 species=Capnocytophaga gingivalis genus=Capnocytophaga taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_46_850 organism_group=Bacteroidetes rbh
DNA-binding protein
Tax=BJP_08E140C01_Bacteroidetes_41_49
scnpilot_p_inoc_scaffold_1871_7
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8109..9122
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ENP5_RUNSL rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEI50621.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 2953
scnpilot_p_inoc_scaffold_1871_8
Capnocytophaga sp. oral taxon 336, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9150..9452
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 336 str. F0502 RepID=S3BUJ0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EPD97812.1}; TaxID=1203603 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp.
scnpilot_p_inoc_scaffold_1871_9
Bacteroides sp. CAG:661, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9665..10438
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:661 RepID=R5SKQ0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ47281.1}; TaxID=1262746 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bactero
hypothetical protein
scnpilot_p_inoc_scaffold_1871_10
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

10621..10998
DNA (378bp) protein (126aa)
id=3827876 bin=GWF2_Bacteroidetes_29_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes
id=3827876 Tax=GWE2_Bacteroidetes_29_8_curated
scnpilot_p_inoc_scaffold_1871_11
Flavobacterium sp. CF136, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11005..11220)
DNA (216bp) protein (72aa)
Putative transcriptional regulator n=1 Tax=Flavobacterium sp. CF136 RepID=J2JSG6_9FLAO
Putative transcriptional regulator {ECO:0000313|EMBL:EJL63948.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavoba
ydcN; transcriptional regulator
scnpilot_p_inoc_scaffold_1871_12
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11317..11511
DNA (195bp) protein (65aa)
HSP20-like protein n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BGB6_ZUNPS
HSP20-like protein
HSP20-like protein {ECO:0000313|EMBL:ADF51075.1}; TaxID=655815 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zunongwangia.;" source="Zunongwangia profunda (str
scnpilot_p_inoc_scaffold_1871_13
unknown

Not on your lists

11527..11697
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1871_14
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11778..13112
DNA (1335bp) protein (445aa)
Abortive infection protein, putative n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0R8_EMTOG rbh
abortive infection protein, putative
Abortive infection protein, putative {ECO:0000313|EMBL:AFK05521.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica
scnpilot_p_inoc_scaffold_1871_15
Emticicia oligotrophica, Emticicia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13087..13794
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2F0R7_EMTOG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK05520.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM
scnpilot_p_inoc_scaffold_1871_16
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13970..14401
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036223E1
Putative lipoprotein {ECO:0000313|EMBL:ERF59826.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. socranskii VPI DR56
hypothetical protein
scnpilot_p_inoc_scaffold_1871_17
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14615..15736
DNA (1122bp) protein (374aa)
hypothetical protein FbacHQ_14909 id=1985995 bin=GWB2_Bacteroidetes_32_14 species=Flavobacteriaceae bacterium HQM9 genus=unknown taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47 rbh
hypothetical protein Tax=GWD2_Bacteroidetes_33_33_curated
hypothetical protein
Displaying 17 items

View Taxonomy