ggKbase home page

scnpilot_p_inoc_scaffold_21_14

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(17893..20070)

Top 3 Functional Annotations

Value Algorithm Source
Parallel beta-helix repeat protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XWL0_PEDHD similarity UNIREF
DB: UNIREF100
  • Identity: 37.9
  • Coverage: 734.0
  • Bit_score: 517
  • Evalue 2.20e-143
  • rbh
parallel beta-helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 37.8
  • Coverage: 735.0
  • Bit_score: 517
  • Evalue 6.30e-144
Parallel beta-helix repeat protein {ECO:0000313|EMBL:ACU06299.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedoba similarity UNIPROT
DB: UniProtKB
  • Identity: 37.8
  • Coverage: 735.0
  • Bit_score: 517
  • Evalue 3.10e-143

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter heparinus → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2178
GTGGTTATGAAACAACTTCAGCTATTAATTATTTTTTATTTGTTAGGTTCCTTATATCCGCCCATCGGAAGTGCCGCTGCTAAAGAATTTTTTGTGTCGCTTGAGTCGAATTCAAGAAATCTGGGGACACGCGATAATCCTTTTTGCAGTTTGAGGGATGCTCAGCTTGCCGTACGCAAGTACAAAGCTAAGCATCCCGAAAAGCCCGTCACAGTGTGGTTGAGAAAAGGGGTGTACGAATTGTCGGGTAGTTTTGAACTTAATAAATACGATTCGGGAACTCCAACCGGTCGGATCACCTATACGGCATATCCTGGCGAAGCAGTGACCTTGATGGGCGGACGTATGATATCTGTTCCATCGGTTCGGAATTGCAGCGACACTCCGCTGCCCGATAAGCTGAATGGAGGGCAAGTGGTTGATAAATTGAAAGTTGTGGACCTGGCGGCATTGGGTATCACCGATTACGGCCAACTTCAACCCACAGGCTTCCGAAGGCCGTATGTAAATGCAGCCATGGAATTATTTATTAACGGGAGGCCTTTCCAGCTTGCCAGATATCCGAATAGTGGGATGTTGCAGATTACCCCCGATGCTGTGATTGACGATGGTATAACAGATCATACCTTTTATCCGGGGAGCTTACGTTTCGACAAGGAAAAACTCACAAAATGGTCGAAGGCCCGTGACATTTTCACCTGTGGCAATTATAAATACGCCTGGGCCACCGATCAGCTGAGAGTGAAACGAATTGACCCGGTTAAGGGGGAAGTAAGCTTTGCCGATGCTCATATGTTCGGCATTTCAGGCGATCATGAATGGAATCAGTATTATTTTTTCAACCTCTTGGAAGAGTTGGATTCTCCGGGCGAATACTATATCGATAGGATCAACGGCTTGTTGTATTTTTATCCGTATGACGACATATCACCCACCGATTCTTTGTATGTATCGGTATTGGAAACTCCACTCATTGCTATAAAAGGAGCCAATTATATCAGTATTGAAAATATTGTCGTGGAAGCCGGACGAGGTATAGGGGTATATATGGAAGAAACGAATGAAAATGTAATACAAAACTGTATATTTCGTAATTTGGGAGTGTTAGGTGTATGTGTTGGGAAAGGGAGCAGATCGACAACAATTTATGGTCATCCTGACGAGCAACACCCTTTTTTACCTCAGGAAAAAATATCGGAAGCAGTGGGTAGTCTTTACGATTATTTATATGAAAATCCGGTCTTTGTTCGGGATGGCGGCAAGAATAATGGGATCGTAAATTGCGAATTTCAAAATATCGGATGTGGTGGTGTTAGTTTGGGGGGAGGGAATCGGTTGACGCTGGAAAAGGCCGGTAACTACATTCGGCAGTGCGAATTTACAAATTGCGGTCGATTGGATTATTCATACAAAGCACCTGTAAATATCGATGGAGTTGGTAACCTGATTCAACATTGTCAGTTTAATACTTGTCCGGCTACTGCTATCTATATTCATGGTAACGAGCATGTTATCGAATATAATGTTATTGAAAGAGCCTGTACGTTTATGGACGATCAGGGAGCTGTTTACCTGGGACGCGATCCGTCGGAATTTGGAAACATTATCCGGTATAATTTTTTTAAAGAAATTGGCAATATCGGGACTACTGTTGCGGTATATTATGATGATGGTGCAAGTGGAACCCTGCTGTATGGCAATGTGTTTTACAAGGCCGGCACTCGTTCGGTTTTAATAGGTGGAGGACATTACAATACCGTTGAAAATAATATCTTTATCCAATCTCCCGTAGCGATTCATCTCGACAACCGATTTGCAAGTTGGGCGAAAAATTCGATTGTGGCCGGAGGAATATTCGAAGTGCGTTTAAATGCGGTTAATTATCTGAAACCACCCTATGTAAACCGTTATCCGGAACTGACAAATTTTTTTAAGGATAATCCTGCCGTTCCCAAGGAAAATGTATTTCGCAACAATGTTTTTGTTCATGTACAACGTGTTTACGACGGTAAAAAAGAATGGGGGCCTGCTGAAAACGAGAATTACATTACCAATCAGGATATTGGATTTGAGAATGACACGGCATTGAATTTCAATTTGAAAGCCGACGCACTTATTTTCAGAAAATTACCCGATTTTAAATCGATACCTTTTTATGCCATAGGGCGTAAGCGTTAA
PROTEIN sequence
Length: 726
VVMKQLQLLIIFYLLGSLYPPIGSAAAKEFFVSLESNSRNLGTRDNPFCSLRDAQLAVRKYKAKHPEKPVTVWLRKGVYELSGSFELNKYDSGTPTGRITYTAYPGEAVTLMGGRMISVPSVRNCSDTPLPDKLNGGQVVDKLKVVDLAALGITDYGQLQPTGFRRPYVNAAMELFINGRPFQLARYPNSGMLQITPDAVIDDGITDHTFYPGSLRFDKEKLTKWSKARDIFTCGNYKYAWATDQLRVKRIDPVKGEVSFADAHMFGISGDHEWNQYYFFNLLEELDSPGEYYIDRINGLLYFYPYDDISPTDSLYVSVLETPLIAIKGANYISIENIVVEAGRGIGVYMEETNENVIQNCIFRNLGVLGVCVGKGSRSTTIYGHPDEQHPFLPQEKISEAVGSLYDYLYENPVFVRDGGKNNGIVNCEFQNIGCGGVSLGGGNRLTLEKAGNYIRQCEFTNCGRLDYSYKAPVNIDGVGNLIQHCQFNTCPATAIYIHGNEHVIEYNVIERACTFMDDQGAVYLGRDPSEFGNIIRYNFFKEIGNIGTTVAVYYDDGASGTLLYGNVFYKAGTRSVLIGGGHYNTVENNIFIQSPVAIHLDNRFASWAKNSIVAGGIFEVRLNAVNYLKPPYVNRYPELTNFFKDNPAVPKENVFRNNVFVHVQRVYDGKKEWGPAENENYITNQDIGFENDTALNFNLKADALIFRKLPDFKSIPFYAIGRKR*