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scnpilot_p_inoc_scaffold_21_18

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(26613..27191)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor expansion family 1 n=1 Tax=Bacteroides cellulosilyticus CAG:158 RepID=R6KEQ3_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 192.0
  • Bit_score: 193
  • Evalue 2.00e-46
RNA polymerase sigma-70 factor expansion family 1 {ECO:0000313|EMBL:CDB73618.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental similarity UNIPROT
DB: UniProtKB
  • Identity: 47.9
  • Coverage: 192.0
  • Bit_score: 193
  • Evalue 2.80e-46
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 195.0
  • Bit_score: 191
  • Evalue 1.60e-46

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Taxonomy

Bacteroides cellulosilyticus CAG:158 → Bacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 579
ATGAATGAACGAGATGAATTGTATCTTCTGCTAAAAGGAAGTACGTCAGCCTTTGAACATTTATATAATTTATATAGTGGTAAGCTGTTTAATTTTTGTTTGAAGCTTACGAACGGGAATAAGTACATTTCCGAGGAATTGACTCAACGAACCTTTGTAAAGGTATGGGAAAAGCGTAGCTCTATTGATCCCGAACGATCGTTTGTGTCATTTATATGCACCATTGCCAAAAACATGTTGCTCAACGATTTTGAACATGAAACGGTTAAATTTATATATGCCGAGTATGTGAAAAGTGCGGCGCACATACAACATGAAAATGCAACAGAGCTGGAGGTGGAACGTAATTTATTAGAAAACCTGATTGATAAAATTACGGAAGAATTACCCCCTAAACGAAAAGAAATATTTATTTTGAGTAGAAAGCGAGGATATTCGAACAAACATATTGCAGAGTACTTACACATTTCAGAAAGTACCATTGAGACTCAATTAACCAAGTCCTTGGCTTTTATGAAAGAAAAGTTAAAGTATTACGGAAGCTATTTTGTATTTTTGTGTTACTTTTGGGTCATGTAA
PROTEIN sequence
Length: 193
MNERDELYLLLKGSTSAFEHLYNLYSGKLFNFCLKLTNGNKYISEELTQRTFVKVWEKRSSIDPERSFVSFICTIAKNMLLNDFEHETVKFIYAEYVKSAAHIQHENATELEVERNLLENLIDKITEELPPKRKEIFILSRKRGYSNKHIAEYLHISESTIETQLTKSLAFMKEKLKYYGSYFVFLCYFWVM*