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scnpilot_p_inoc_scaffold_21_52

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 67329..69116

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 595.0
  • Bit_score: 1060
  • Evalue 0.0
Elongation factor 4 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T776_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 595.0
  • Bit_score: 1060
  • Evalue 0.0
  • rbh
GTP-binding protein lepa similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 595.0
  • Bit_score: 1060
  • Evalue 0.0

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1788
ATGAACAACATCCGTAATTTCTGTATCATCGCCCATATCGACCACGGTAAAAGCACTCTGGCCGACCGTCTGCTCGAATATACTAAAACCGTATCCGACAAGGACTTACAGGCGCAGGTGCTCGATAATATGGACCTGGAGCGAGAGCGGGGCATCACCATCAAAAGTCACGCGATTCAAATGAATTACGTGCAGGACGGTCAGACGTATACCTTTAACCTGATCGACACCCCGGGGCATGTCGATTTCTCGTACGAAGTATCGCGGTCGATTGCCGCCTGCGAAGGAGCGCTGCTCATTGTCGATGCCACGCAAGGCATTCAGGCTCAAACCATTTCGAACCTATACATGGCCATCGAGCACGATCTGGAAATCATCCCCGTGATGAATAAAATGGATATGGACTCGGCGATGCCCGACGAAGTAGAGGATCAGATTGTGGATCTGTTGGGTTGTAAGCCGCACGAGATTATTCGTGCCAGCGGAAAAACCGGGATGGGCGTGGAAGAAATTCTCCGGGCTATTGTCGAGCGGATTCCGGCCCCCAAAGGCGATCCCGACGCACCGCTGCAATGCCTCATCTTCGACTCCGTATTTAATTCGTTCCGGGGGATTATTGCTTATTTTAAAATTGAGAACGGCACCATCCGCAAGGGAGATCTTGTGAAGTTTGTGGCTACCGGGCGGGAGTACGATGCCGACGAGATCGGGATTTTACGCCTCGACATGGTACCGCAACAGGAATTGAGTGCCGGAAACGTAGGTTACATCATTTCGGGAATAAAGACTTCGAAAGAGGTGAAGGTGGGCGATACGATTACGCATACGAAACGTCCTTGTGCTACGGCCATCGATGGTTTTGAAGAAGTGAAGCCGATGGTGTTCGCAGGCGTATATCCCATCGAAACGGAAGACTTTGAAGACCTTCGCACTGCGATTGAGAAACTTCAGCTCAACGATGCATCGCTCACGTTCGAGCCCGAATCGTCGGTGGCCCTCGGTTTTGGATTCCGTTGCGGTTTCCTCGGGATGCTGCATATGGAAATCGTGCAGGAACGTCTCGACCGGGAGTTCGACATGAACGTGATTACTACGGTGCCCAACGTGTCGTACAAAGTATATACAAAGAAAGACGAAATGATGGAGGTGCACAACCCTTCGGGGCTGCCCGATCTGATGACGGTGGATCGCATCGAGGAGCCGTATATCCGCGCATCCATCATCACGCGTACCGATTATATCGGTCAGATCATGACGCTGTGCCTCGATAAGCGGGGTGAGCTCATCAAACAGGAGTACATTTCGGGGAATCGCATGGAGTTGATTTTCGACCTGCCGCTGGGCGAGATCGTATTCGACTTCTACGACCGGCTGAAAAGTATTTCGAAAGGCTATGCCTCGTTCGATTATCATCCGAACGGCTACCGGCCATCGAAACTGATCAAACTCGACATCCTCCTCAACGGGGAGCCTGTGGATGCCCTTTCTTCGCTCATCCATTTCGACAACGCGGTGACGCTGGGCCGGCGGATGTGCGAAAAACTGAAAGAACTGATCCCACGCCAGCAATTCGACATCGCCATTCAGGCGGCCATAGGTGCGAAGATTATTGCGCGTGAAACTATCAAAGCAGTACGTAAAGACGTGACTGCCAAGTGTTACGGGGGCGACATCAGTCGCAAACGCAAACTGCTGGAAAAACAGAAGAAAGGTAAGAAACGCATGAAACAGATCGGCAACGTGGAAGTGCCTCAGAAGGCGTTCCTGGCGGTACTGAAATTGGATTGA
PROTEIN sequence
Length: 596
MNNIRNFCIIAHIDHGKSTLADRLLEYTKTVSDKDLQAQVLDNMDLERERGITIKSHAIQMNYVQDGQTYTFNLIDTPGHVDFSYEVSRSIAACEGALLIVDATQGIQAQTISNLYMAIEHDLEIIPVMNKMDMDSAMPDEVEDQIVDLLGCKPHEIIRASGKTGMGVEEILRAIVERIPAPKGDPDAPLQCLIFDSVFNSFRGIIAYFKIENGTIRKGDLVKFVATGREYDADEIGILRLDMVPQQELSAGNVGYIISGIKTSKEVKVGDTITHTKRPCATAIDGFEEVKPMVFAGVYPIETEDFEDLRTAIEKLQLNDASLTFEPESSVALGFGFRCGFLGMLHMEIVQERLDREFDMNVITTVPNVSYKVYTKKDEMMEVHNPSGLPDLMTVDRIEEPYIRASIITRTDYIGQIMTLCLDKRGELIKQEYISGNRMELIFDLPLGEIVFDFYDRLKSISKGYASFDYHPNGYRPSKLIKLDILLNGEPVDALSSLIHFDNAVTLGRRMCEKLKELIPRQQFDIAIQAAIGAKIIARETIKAVRKDVTAKCYGGDISRKRKLLEKQKKGKKRMKQIGNVEVPQKAFLAVLKLD*