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scnpilot_p_inoc_scaffold_21_100

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 130023..132167

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacte similarity UNIPROT
DB: UniProtKB
  • Identity: 78.0
  • Coverage: 713.0
  • Bit_score: 1165
  • Evalue 0.0
RNAse r (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 713.0
  • Bit_score: 1165
  • Evalue 0.0
Ribonuclease R n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T775_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 78.0
  • Coverage: 713.0
  • Bit_score: 1165
  • Evalue 0.0
  • rbh

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2145
ATGTCACGCAAAAGCAAAAAACAGGGAGGCAGTACCCGTCTCCGCAAAACCGACCTGGTACGCAACATCGTCAACCTCTTCAAAGACAGTCCCGAAACAATTTTCAACTATAAGCAGATCAGCAAATTACTCACCATAAAAAGTGAGTCGCAAAAAGTATTCGTGAATCAGATACTGTACGAACTGCACGACGAAGATTTCATCACCGAAGTTTCGAAAGGCAAGTTCAGGCTCAACTCGAGGGGCGGGTTTATCACCGGAACCATCACCCGCGAGGGAGTAAAAACCTTTTTAATGCCCGACGATGGCGGCGAGCTGGTGTTTATCCCCGAACGCAAAACCAACCACGCCTTGCTCAACGACAAGGTGAAGGTATTTTTGTACGCCCGCCGCAAGGGGCAGATGCCCGAAGGCGAAGTGGTGGACATCACCGAACGGGCCAAGGATACTTTTGTCGGGATTCTGGAGGTTTCGGATAATTATGCTTTCCTGATTTGCGACAACCGGGTGTTGACCACCGATGTATTTATCCCTAAATCGAAACTGAACGGGGCAAAGGACGGGCAGAAGGTGATTGTGAAATTGCTGCAATGGGAGCCTAACCTGAAAAACCCGGTGGGCGAAGTCATCGACATCCTGGGAAACAAAGGCAACAACGACGCCGAAATGCACGCTATCCTGGCCGAGTACGGCTTGCCCTACACCTACCCGGCCGAGGTGGATACTGCCGCATCGAAAATGGATGCCGGCATTACACCCGACGAGATAGCCCGCCGGACCGATATGCGGGGCATCACTACCTTTACCATCGACCCGCGCGATGCCAAGGATTTCGACGATGCGCTTTCGCTGCGAAAGCTCGGCAACGGGTTGTGGGAAGTAGGCGTTCATATTGCCGATGTAACGCATTACGTGCGGCCGGGCAGCATTATCGACCGCGAAGGGCGCGACCGGGCTACCTCGGTGTACCTCGTCGACCGCACCATACCGATGTTGCCCGAGCATCTTTCCAACGGTATTTGTTCGCTCAGGCCCGATGAAGATAAGTTGACTTATTCGGTCGTTTTTCAAATGAACGACGACGCCGAGGTGAAACAGTACCAGATTGCTAAAACGGTAACGCGAAGCGACCGCCGGTTTACCTACGAAGAAGCGCAGCAGGTGATTGAAACCGGACAGGGCGATTACAAGGCCGAGATCCTCACGCTCGACCGCCTGGCAAAAATCCTCCGCCGGCGACGGTTCGAAAACGGCGCCATCGCGTTCGACCGGGTAGAAGTGCGGTTTGAAATCGACGAACAGGGTAAGCCTTTATCGGTGTTTTTCAAGGAACAAAAAGATGCTAACAAGCTGATAGAGGAATTCATGTTGCTGGCCAACCGGACGGTAGCCACTCATATCGGTAAGCCGGGCAGGGGCTTAAAGGCCAAAACCTTCGTATACCGGGTGCACGATGTGCCCGATCCCGACAAACTTCAGAATTTCTCGCAGTTTATCAAAAAATTCGGGTATACGCTGAAAACCACAGGAAAGCAGGCGGTAATATCGGGTTCGATCAATCAGCTGCTCGACAAGGTGGAGGGACGCAAGGAGCAAAACCTGATTGAAACGCTGGCGATCCGGTCGATGGCCAAAGCTACTTATACCACCGAAAATATCGGTCATTACGGGTTGGGCTTCGAGCATTACACCCATTTCACTTCGCCCATCCGCCGTTATCCCGATATGATGGTACACCGGTTGCTGGAGCGCTATGCCGAGGGAGGCAGGAGTGTCAACCAGCAGGAGTACGAAGATCTGTGCCGGCACAGTTCGGAGCGCGAACAACTGGCGGCCAATGCCGAACGCGCTTCGATCAAATACAAACAGGTCGAATTTATGTCGGGGCATCTGGGCGAAGAGTTCGACGGGGTGATTTCGGGGGTTACCGAATGGGGAATTTATGTTGAAATTGTGGAGAACAAGTGTGAGGGTATGGTGCCGATCCGGGATCTCGACGACGATTATTACACCTTCGATGAAAAGAATTACTGCCTGGTGGGACGCCGCTACCAGCGTCGTTTCCAGCTGGGTGATGAAGTGCGGGTGCAGGTGGCGCGGGCCAACCTGGATAAAAAGCAGTTGGATTTCACCTTATGCGAATAA
PROTEIN sequence
Length: 715
MSRKSKKQGGSTRLRKTDLVRNIVNLFKDSPETIFNYKQISKLLTIKSESQKVFVNQILYELHDEDFITEVSKGKFRLNSRGGFITGTITREGVKTFLMPDDGGELVFIPERKTNHALLNDKVKVFLYARRKGQMPEGEVVDITERAKDTFVGILEVSDNYAFLICDNRVLTTDVFIPKSKLNGAKDGQKVIVKLLQWEPNLKNPVGEVIDILGNKGNNDAEMHAILAEYGLPYTYPAEVDTAASKMDAGITPDEIARRTDMRGITTFTIDPRDAKDFDDALSLRKLGNGLWEVGVHIADVTHYVRPGSIIDREGRDRATSVYLVDRTIPMLPEHLSNGICSLRPDEDKLTYSVVFQMNDDAEVKQYQIAKTVTRSDRRFTYEEAQQVIETGQGDYKAEILTLDRLAKILRRRRFENGAIAFDRVEVRFEIDEQGKPLSVFFKEQKDANKLIEEFMLLANRTVATHIGKPGRGLKAKTFVYRVHDVPDPDKLQNFSQFIKKFGYTLKTTGKQAVISGSINQLLDKVEGRKEQNLIETLAIRSMAKATYTTENIGHYGLGFEHYTHFTSPIRRYPDMMVHRLLERYAEGGRSVNQQEYEDLCRHSSEREQLAANAERASIKYKQVEFMSGHLGEEFDGVISGVTEWGIYVEIVENKCEGMVPIRDLDDDYYTFDEKNYCLVGRRYQRRFQLGDEVRVQVARANLDKKQLDFTLCE*