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scnpilot_p_inoc_scaffold_21_197

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 256887..257429

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T6D3_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 67.2
  • Coverage: 180.0
  • Bit_score: 258
  • Evalue 4.70e-66
RNA polymerase sigma-24 subunit rpoe similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 180.0
  • Bit_score: 258
  • Evalue 1.30e-66
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter.;" source="Paludibacter propion similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 180.0
  • Bit_score: 258
  • Evalue 6.50e-66

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 543
ATGAGCAAAACTGAAGATCTGAAATGGGTATCCCGCGCCACCCTGCTGGGTGACACCACTGCCTTCGATCATCTCGTCCGCAAATACCAGTCGTCCATCCGACGGTTCTTTCTGAACCTGACGATGGGCGACACCCAGCTGAGCGACGACCTGGCGCAGGAAACCTTTATCAAGGCCTGGCTCAACCTGAGTAGTTTTCAGGGGCTGGCCGGCTTTTCGACCTGGCTGTTTCGCATTGCCTACAACGTATATTACGATGCGGTGCGGTCGCGGAAGTTCACTTCGGAGATCGACGAAACGGAGGTGAACCGCATGTACCAGGCCGAAAACGAATTTTCAGGCTCGAAGCTCGACATTCATACAGCACTGCAATTACTCCGGAAGGAGGAACGAACCGCGATTCTGCTTTTCTATATGGAAGATAAAAACCACAAGGAGATCGCTAAAATCATGGATAGCCCGCTGGGAACTATCAAGACCTATATCCTGAAAGGGAAAGAAAAAATGGGGAAATATTTAAAAGAAAATGGTTATGAAGAATGA
PROTEIN sequence
Length: 181
MSKTEDLKWVSRATLLGDTTAFDHLVRKYQSSIRRFFLNLTMGDTQLSDDLAQETFIKAWLNLSSFQGLAGFSTWLFRIAYNVYYDAVRSRKFTSEIDETEVNRMYQAENEFSGSKLDIHTALQLLRKEERTAILLFYMEDKNHKEIAKIMDSPLGTIKTYILKGKEKMGKYLKENGYEE*