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scnpilot_p_inoc_scaffold_377_2

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(569..1246)

Top 3 Functional Annotations

Value Algorithm Source
ribosomal large subunit pseudouridine synthase d (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 218.0
  • Bit_score: 343
  • Evalue 5.10e-92
Ribosomal large subunit pseudouridine synthase D {ECO:0000313|EMBL:ADQ78854.1}; EC=5.4.99.- {ECO:0000313|EMBL:ADQ78854.1};; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; P similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 218.0
  • Bit_score: 343
  • Evalue 2.50e-91
Ribosomal large subunit pseudouridine synthase D n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T2B0_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 218.0
  • Bit_score: 343
  • Evalue 1.80e-91
  • rbh

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 678
ATGACTGTTTTGTACGAAGATAATCACCTGATTGTGGTGAATAAGTCGTCGTCGGAGATTGTACAGGGCGACAAAACCGGCGACGAGCCCTTACCCGAGGTGGTAAAGCGTTATATCAAAGCGAAGTACAACAAGCCGGGCGAAGTGTTTCTGGGGGTTACCCACAGACTCGATCGCCCGGTGAGTGGTGTCGTGGTTTTTGCGCGTACTTCCAAGGCGTTGGCGCGAATGAATGAACTCTTTCGTACGCACCGGGTGAAGAAGATTTATTGGGCCATCGTAAAAGCAACACCCGAGCCGACCGAAGCACGAATCATCCATCACCTGGTACGAAACGAAAAGCAAAATAAATCCTATGCCTACGATAAACCGGTGCGCGGTTCAAAAGAAGCTATGCTTTCGTACCGCCTGATAGCGCATTCCGACCGCTACAATCTGCTCGAAGTTGAATTGGAGACGGGTCGTCATCACCAGATTCGCTGCCAGCTTGCAAAAATCGGTTGTCCTATTAAAGGCGACCTTAAATACGGCTTTGCCCGCTCCAATCCCAACGGCGGCATCAGTCTCCATGCCCGCCGGGTGGAGTTCATCCATCCGGTTTCCAACCAACCTGTCGCGGTAGAAGCTCCTGTCCCCGACGATGAACCGCTGTGGAAGGCCTTTGGCGTTTTTGACTAA
PROTEIN sequence
Length: 226
MTVLYEDNHLIVVNKSSSEIVQGDKTGDEPLPEVVKRYIKAKYNKPGEVFLGVTHRLDRPVSGVVVFARTSKALARMNELFRTHRVKKIYWAIVKATPEPTEARIIHHLVRNEKQNKSYAYDKPVRGSKEAMLSYRLIAHSDRYNLLEVELETGRHHQIRCQLAKIGCPIKGDLKYGFARSNPNGGISLHARRVEFIHPVSNQPVAVEAPVPDDEPLWKAFGVFD*