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scnpilot_p_inoc_scaffold_310_6

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 5873..6769

Top 3 Functional Annotations

Value Algorithm Source
LytTr DNA-binding domain protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZ84_BACPM similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 193.0
  • Bit_score: 114
  • Evalue 1.80e-22
two-component system response regulator Tax=CG_Paludi_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 54.8
  • Coverage: 104.0
  • Bit_score: 119
  • Evalue 7.90e-24
Response regulator of the LytR/AlgR family similarity KEGG
DB: KEGG
  • Identity: 44.4
  • Coverage: 126.0
  • Bit_score: 109
  • Evalue 1.30e-21

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Taxonomy

CG_Paludi_01 → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 897
ATGGAGGTTCACAAACCCGATATCGAACGCAACCGACTTGTTGAAGTCATTGTAATTGCAGCAGTATGGATTGTTGTATTTACTATTCCGTTGTTTTCAAATCACCAAAACGGAACCTATCAATGGAGCGAAATTCATCACGACTGGTTGCAACTGGCCGTATTATTCCTGATTTATATCGGGAATATCGCTTTTATTATCCCCCGCTATCTTCACAAAAAACATTACCTGCACTACCTGGTCGTTTTACTGGTTGCGTTGCCGCTGATTACCTGTATCGAACTTCAGCTCCACACCTTATTGAAACAGGAGCAGGTTGTCACAATGCCTTCGATGGATAAAGGAACCCCCATTGAGTTCTCGAGCGAAATGCCGGCGCCCGAGGGTTTCCGGTTGACCGAGAGGAAAAACTCAAAAAACAATTCGCCGGATTTCTGGACGCATTTACTCATTGCACTCCTGGTAACCGGAAGTGCTGCTGCGCATAAAATGCTGTCATACTGGATTCAGGAAGAAAAAACACGAAAGACAATCGAAAACAAATTAAAAAGGGAGCTTTCCGAACCTCAACCCGGTTTTATCATCGTCAAATCCGACTATAAATCGGTAAAGCTGATGTTCGACGATATCTTATACATTGAAAGTGCCAACGAATATGTGAAAATATACCTTTCAGGGGGCGAAATGATAATGACGTTCATGCGCTTAAAAAACATGGAAAACGAATTACCCAAAGACAAATTCATGAGGGTGCAACGATCCTTCATCGTGAATCTTGAAAAAATAAAAGCAGTAGAAAAGAATAAAATATACATCGAACATAAAAAAACGATACCCATTGGAGAACAATACAAAGTAAGTTTTCAGGAATTTCTAGGAAAACACTTTGTAAAATGA
PROTEIN sequence
Length: 299
MEVHKPDIERNRLVEVIVIAAVWIVVFTIPLFSNHQNGTYQWSEIHHDWLQLAVLFLIYIGNIAFIIPRYLHKKHYLHYLVVLLVALPLITCIELQLHTLLKQEQVVTMPSMDKGTPIEFSSEMPAPEGFRLTERKNSKNNSPDFWTHLLIALLVTGSAAAHKMLSYWIQEEKTRKTIENKLKRELSEPQPGFIIVKSDYKSVKLMFDDILYIESANEYVKIYLSGGEMIMTFMRLKNMENELPKDKFMRVQRSFIVNLEKIKAVEKNKIYIEHKKTIPIGEQYKVSFQEFLGKHFVK*