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scnpilot_p_inoc_scaffold_310_20

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(22021..22506)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L17 n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T7C3_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 160.0
  • Bit_score: 261
  • Evalue 4.90e-67
50S ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 160.0
  • Bit_score: 261
  • Evalue 1.40e-67
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=694427 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Paludibacter. similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 160.0
  • Bit_score: 261
  • Evalue 6.90e-67

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Taxonomy

Paludibacter propionicigenes → Paludibacter → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 486
ATGAGACATAATAAGAAATTCAATCATTTAGGCCGTAAAACGGCTCACAGAAAGTCAATGCTGGCTAACATGGCAATCTCTCTTATCCAGCACAAGAGAATCGCAACTACATTGGCAAAGGCAAAAGCTTTGCGTGTATATGTTGAACCTCTGCTGACTAAATCGAAAGAGGATACAACCAATTCGCGCCGTGTTGTATTCAGCTATTTGCAGAATAAAGAAGCGGTAACTGAATTGTTTCAGAATATCTCGCAGAAAATTGCCAATCGTCCGGGTGGTTATACCCGTATTCTTCGTACCGGTTTCCGTTTGGGTGATAACGCTGAAATGTGTATTATCGAATTGGTGGACTACAACGAGAACATGCTGAAGGAAAAAACAGCGAAAAAGGCTACCCGTACCCGTCGTGGCGGGGCTAAGAAAGAAGCCGTTGCAGCTGCTCCTGAAGCAGCTCCTGCAGCTCCTGCCGAAACTGCTGCCGAATAA
PROTEIN sequence
Length: 162
MRHNKKFNHLGRKTAHRKSMLANMAISLIQHKRIATTLAKAKALRVYVEPLLTKSKEDTTNSRRVVFSYLQNKEAVTELFQNISQKIANRPGGYTRILRTGFRLGDNAEMCIIELVDYNENMLKEKTAKKATRTRRGGAKKEAVAAAPEAAPAAPAETAAE*