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scnpilot_p_inoc_scaffold_310_94

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(88910..89470)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Paludibacter propionicigenes (strain DSM 17365 / JCM 13257 / WB4) RepID=E4T579_PALPW similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 180.0
  • Bit_score: 205
  • Evalue 6.30e-50
RNA polymerase, sigma-24 subunit, ecf subfamily similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 180.0
  • Bit_score: 205
  • Evalue 1.80e-50
Uncharacterized protein {ECO:0000313|EMBL:EGK00730.1}; TaxID=742766 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas gadei ATCC BA similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 174.0
  • Bit_score: 205
  • Evalue 8.90e-50

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Taxonomy

Dysgonomonas gadei → Dysgonomonas → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATGTCGACAACCCGGTACAACGAACAGGAGCTGATTACTGCAGTTAGACGAGGGGAGGCTAGGGCGCAACGTGAACTCTACGAGCGCTTTGTGCCGACCATGTTTGCCGTGTGCAGCCGGTATGCCCCCGATCCGGACACCGCGAAAGACTTGTTGCAGGATGGATTTGTGAAGGTATTTACAAAGATTGATTCGTATGCCGGCACAGGTTCGTTCGAAGGATGGATGAGAAGAGTATTTGTGACTACCTGTCTCGAGTTTTTACGTCAGAAGCACGCATTGAAATTTGCAGCTTCGATCGACGATCAGGAGATTCAGGTTGCCGGCCATGAGGCTTCGGTGGTTGAACAGCTGTCGGCCAACGAACTCATGAAGCTGATTAATAGTTTGTCCGACGGCTACCGGACTGTGTTTAACATGTATGCTATCGAAGGTTATTCGCATGCCGAAATTGCACAGGAGCTGGGAGTGAACGAGGTTACTTCGAGGACGCAATTTATGCGGGCCCGGAAAATTTTACAGGGAATGATTGAGAGGATATCGAAAAATGGAAAAAAATAA
PROTEIN sequence
Length: 187
MSTTRYNEQELITAVRRGEARAQRELYERFVPTMFAVCSRYAPDPDTAKDLLQDGFVKVFTKIDSYAGTGSFEGWMRRVFVTTCLEFLRQKHALKFAASIDDQEIQVAGHEASVVEQLSANELMKLINSLSDGYRTVFNMYAIEGYSHAEIAQELGVNEVTSRTQFMRARKILQGMIERISKNGKK*