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scnpilot_p_inoc_scaffold_320_10

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 17845..18426

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Parabacteroides RepID=N2B9S2_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 186.0
  • Bit_score: 214
  • Evalue 8.30e-53
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EOS15901.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 186.0
  • Bit_score: 214
  • Evalue 1.20e-52
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1 similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 180.0
  • Bit_score: 190
  • Evalue 6.20e-46

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 582
ATGGATAACGATTCTGATTGGTTGAAGAAGATGTCCAAAGATGATATGGATGCTTTTTCGTATATATTCAGAAAGTATTATAAGGATTTGGTTTTGTTCGGAGGAGCTTATCTGGCAAATAGACAAACATGCGAGGATATTGTTCAAAATATATTTTTACGATTGTGGGGTAACCGCAAAAATATCAGCATCGAAACTTCCTTAAAGTCATTTCTGTTAAAATCGGTTCAAAATGCATGTCTCGATGAGTTAAGACATAAAAAAATCATAAGAACACATGAAACATACACAAAAACCTTCGGGACTACTTTTGACGTAGATACGGTCGATTATGTGCTTTATTCGGATTTACACAATCACTTACTACACTCCTTGGATGAGCTACCTCACACGTATCGTGAGGTATTCGAAATGAATCGTTTTGAAGGTTTAACGTATAAAGAAATTGCAATCAAACTGGACGTTTCGGAAAGGACGGTCGAAGTACGTATCGGCAAAGCCTTAGCGTTATTACGACGGTACCTGAAAGAGTTTCTAAGCGTCTTGGTTTTTACCAGGTTGTTAAACTTAGTGAATTTATAG
PROTEIN sequence
Length: 194
MDNDSDWLKKMSKDDMDAFSYIFRKYYKDLVLFGGAYLANRQTCEDIVQNIFLRLWGNRKNISIETSLKSFLLKSVQNACLDELRHKKIIRTHETYTKTFGTTFDVDTVDYVLYSDLHNHLLHSLDELPHTYREVFEMNRFEGLTYKEIAIKLDVSERTVEVRIGKALALLRRYLKEFLSVLVFTRLLNLVNL*