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scnpilot_p_inoc_scaffold_465_19

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 20963..22318

Top 3 Functional Annotations

Value Algorithm Source
Putative two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PCT1_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 448.0
  • Bit_score: 416
  • Evalue 2.60e-113
  • rbh
Regulator {ECO:0000313|EMBL:KIF30117.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.6
  • Coverage: 443.0
  • Bit_score: 428
  • Evalue 9.20e-117
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 448.0
  • Bit_score: 416
  • Evalue 7.20e-114

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Taxonomy

Hassallia byssoidea → Hassallia → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 1356
ATGGAGAGACTCACTGTTTTTATTGTCGAAGATGATCCCTGGTACGGAGAAATCCTGAAACATCATCTTACACAGCAGTCGAATATGGAGGTAAGCCTGTTCACGACTGCGCGCGATTGCCTGCAGGAATTACGCCGGAATCCTGATGTGGTATGTGTTGATTACGGATTGCCCGATATGGACGGCGACCGGCTGCTCGACGAGCTTATTTTGCGTATCCCCGACTTGCCCGTGATCATTATCAGCGGGCAGGACGATATTTCGGTGGCCGTCAAATTGCTGAAACACGGAGCTCACGACTATTTTCCCAAGGACGATCATACACGCGAACTGCTGCTCAGAGCCATCCTGAATATTCGCGAAAACTTGCAGTTGAAACAACAAGTCCAGGAGCTGACGCAGAAACTTCAGCTGAGTTACGAAATCGAGAAGGCATTCCCCGGTAAAAGTTTTGCAATACGTAAACTGGTGGGATTAATCCACAAAGCCGCCGATACCAATGCCAATCTGCTTCTGACGGGCGAATCGGGAGTAGGAAAGGGAGAAGTGGCCCGTACCATTCACTACAACAGCGACCGGAAACTGAAACCTGTTGTTGAAATCAATGCATCGCTTTTTAATCATGAGAAGCTCGAACGCGAACTCTTTGGATACGATAAAGGGGCTTTCCAGGGCGCTTTCTACAATAAATCCGGTAAATTCGAAGAAGCGGCCGGCGGTACCTTGTTGATCGACGATCTGCACCTGCTCGACCATGCCATGCAGGGAAAATTGCTGCAAGTAGTGCAATCGGGAAAATTCACCCGTTTGGGATCCACCGAGCAACGCCCGGTAGAGTTCAGGCTGATGGGCGCAGTGCCGGTCGATATTGTTGAGGAAGTACGGGAAGGCCGTTTCCGTGAGGACCTTTATTTTGTCATGCACGGCATGTCGATCGAGGTTCCTCCCTTGCGCGAACGGGGGAAGGATATTTTGATTTATGTACGCCGGTTTATTCGCGAATACAGCAATGCCAATAAAAAGCGTAAAATATTCATTTCGCCGGAGGCCGAAGATAAATTGCTTCATTATCATTACCCGGGCAATTTGCGCGAACTGAAAAGCACGATCGATACCGCCTGTGCCATGTGTGCCGATAATATGATAAAGCCCGATAATATTGTATTCCACGAAGTGAGTAAGTATACCCAGTTTTCGAACCGCGACAAAACACTGCGTGAGTTCACTGCTGAAATTATTTCCGATTACCTTAAAAAATACGACCAGGATGTGTTGCTGGTCGCCAAAAAACTCGACATAGGGAAATCGACCATTTATAATATGATGAAAACAGGAGTTATCGATCTTAACAAATAG
PROTEIN sequence
Length: 452
MERLTVFIVEDDPWYGEILKHHLTQQSNMEVSLFTTARDCLQELRRNPDVVCVDYGLPDMDGDRLLDELILRIPDLPVIIISGQDDISVAVKLLKHGAHDYFPKDDHTRELLLRAILNIRENLQLKQQVQELTQKLQLSYEIEKAFPGKSFAIRKLVGLIHKAADTNANLLLTGESGVGKGEVARTIHYNSDRKLKPVVEINASLFNHEKLERELFGYDKGAFQGAFYNKSGKFEEAAGGTLLIDDLHLLDHAMQGKLLQVVQSGKFTRLGSTEQRPVEFRLMGAVPVDIVEEVREGRFREDLYFVMHGMSIEVPPLRERGKDILIYVRRFIREYSNANKKRKIFISPEAEDKLLHYHYPGNLRELKSTIDTACAMCADNMIKPDNIVFHEVSKYTQFSNRDKTLREFTAEIISDYLKKYDQDVLLVAKKLDIGKSTIYNMMKTGVIDLNK*