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scnpilot_p_inoc_scaffold_644_17

Organism: SCNpilot_P_inoc_Paludibacter_47_17

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 12705..13193

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=2 Tax=Parabacteroides RepID=N2B0F4_9PORP similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 162.0
  • Bit_score: 218
  • Evalue 3.70e-54
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EOS16029.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 162.0
  • Bit_score: 218
  • Evalue 5.20e-54
RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 45.6
  • Coverage: 160.0
  • Bit_score: 153
  • Evalue 5.40e-35

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Taxonomy

Parabacteroides goldsteinii → Parabacteroides → Bacteroidales → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 489
ATGTTAAACAAAGCAGAGTTCAAACAGATATTCGACAAGTACTTCGATACGATACGAAGCTTCATCTACTATCGCTGTGGCGATGTAGATGCAGCATCCGATATGGCTCAGGATGTATTTATGAAGATATGGGAGAAACGGGAGCAGCTTAATGCATTGGAGTTAAAGCCGTTGCTTTATAAAATTGCAAACGATATGATCATAAGCAGCTATCGGAAGAATAACAGCCGTGTGGATTATGAGCAAAGCATGACAACGCAGGAACAATCTCAGCTATCTCCCGAAGAAGAATTAAATTTTCAGGAACTATCCTCCATGTATGCCAAAGCACTCGAACAGATGCCCGAAATACAACGTGTTGTATTTCTCATGAACAGAAACGATGAAATGAAATATCACGAAATTGCCGAATGTCTGCAACTAAGTGTGAAAGCTGTGGAAAAGCGAATGAGTGGCGCTTTGCAATATCTCAGGGCTCAATTATTATAA
PROTEIN sequence
Length: 163
MLNKAEFKQIFDKYFDTIRSFIYYRCGDVDAASDMAQDVFMKIWEKREQLNALELKPLLYKIANDMIISSYRKNNSRVDYEQSMTTQEQSQLSPEEELNFQELSSMYAKALEQMPEIQRVVFLMNRNDEMKYHEIAECLQLSVKAVEKRMSGALQYLRAQLL*