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scnpilot_p_inoc_scaffold_99_2

Organism: SCNpilot_P_inoc_Microbacterium_69_20

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(795..998)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Microbacterium RepID=UPI0003753004 similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 67.0
  • Bit_score: 129
  • Evalue 1.60e-27
Cold-shock protein, DNA-binding {ECO:0000313|EMBL:GAD35281.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 67.0
  • Bit_score: 129
  • Evalue 2.20e-27
scoF4; cold shock proteins similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 67.0
  • Bit_score: 124
  • Evalue 1.10e-26

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Taxonomy

Microbacterium sp. TS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGACCAACGGCACCGTCAAGTGGTTCAACGCAGAGAAGGGCTTCGGCTTCATCACGGTCGAGGGCGGTCAGGACGTGTTCGTGCACTACTCGAACATCGACATGACCGGATTCCGCGTGCTCGAAGAGGGTCAGGCCGTCGAGTTCACCGTCGGAACCGGCCAGAAGGGGCCCCAGGCCGAGTCGGTCCGCGTTATCGCCTGA
PROTEIN sequence
Length: 68
MTNGTVKWFNAEKGFGFITVEGGQDVFVHYSNIDMTGFRVLEEGQAVEFTVGTGQKGPQAESVRVIA*