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scnpilot_p_inoc_scaffold_182_17

Organism: SCNpilot_P_inoc_Microbacterium_69_20

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: comp(13018..15072)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1451261 speci similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 697.0
  • Bit_score: 931
  • Evalue 8.60e-268
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FDA46 similarity UNIREF
DB: UNIREF100
  • Identity: 74.5
  • Coverage: 738.0
  • Bit_score: 923
  • Evalue 1.70e-265
  • rbh
rho; transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 733.0
  • Bit_score: 839
  • Evalue 6.90e-241

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2055
GTGGAGTCCCTCTCCGAGATCCAGTCCGAGACCGACGAAGCCCCGCGCGAGGATGCCGCGGCGCAGGAGGTCGTGAACACCGAGAGCCCTGTCGCGGAGGTCGTGACGGAGGCCGCCGAGGCTGTCGTCGAGCCCGCCGCCGAGGCGGAGGCACCCGTCGAGGAGCCCGCCGCTGAAGAGGCTGCTGCTGAAGAGGCGGCTGTCGAGGCGCCGGCCGAGCAGCCTGCCGCCGAGGTCGTGGCGGAGGCCGCGCCCGAGGCTGTTGTCGAGCCCGAGGTTGCTGCTGAGTCTGCGCCCGAGGCCGCTGTCGAGCCCGCCGCGGAGGTCCTCGAGGCCCCGCCCGTGAAGGCGCCGCGCAAGCGCGCGCCGCGCCGCGCGAAGAGCACCGACGTGCTCGCCGCCGAGGCTCCCGCGGCCGACGCTGCTCCCGTGGATGCACCCGCCGAGGCTGAGGCCGCCGTTCCCGCCGAGGAACCGGCCGCCGAGGCATCCGCTGTCGAGGCATCCGACGCGCCAGCTGAGGGTGACGCAGCCGCCGCGCCCGTCGACGGTGACGCCGCCGCGCCCGTCGCCGAGGGCGCTGAGACCCCCGCCGAAAGTGCCGAGGCCGCCGCTGAAGGCGCCGAGGCGCCCGCCGAGAGCGAGACGCCGACGCGCAGCCGCAGCCGGTCGCGCAGCCGCAGCCGCAGCCGCGGTCAGAAGACGGACGGCGGCCAGAACAACACCCAGAACGGCCAGGGCGGGCAGAACGCGCCGGCCGCCGACGAGGCCAAGTCCGACTCCGACGACGAGCAGGCCCAGGGCCGCGGCCGGCAGCGCAACAAGCGCCGTCCGCAGGGCCAGGGCGGCGACGAGTTCGAGACCGAGATCGGCGAGGACGACATCCTCATCCCGATCGCGGGCATCCTCGACGTGCTCGACAACTACGCGTTCGTCCGCACTACCGGGTACCTGCCCGGCACAAGCGACGTCTACGTCTCGCTCGGTCAGGTCAAGAAGTACAACCTGCGCAAGGGTGACGCCGTCGTCGGTGCCATCAAGCAGCCGCGCGAGGGTGAGCAGTCCAGCCGCCAGAAGTACAACGCGCTGGTCAAGGTCGACGCGATCAACGGCCTGTCGGTCGACGACGCCGCGAACCGCGTCGAGTTCGGCAAGCTGACGCCGCTCTACCCGCAGGACCGCCTGCGCCTGGAGACCGCGCCCGAAAAGCTGACCCAGCGCATCATCGACCTCGTCGCCCCCATCGGCAAGGGCCAGCGCGGCCTCATCGTCGCGCCGCCCAAGGCCGGCAAGACGATCGTGCTGCAGCAGATCGCGAACGCGATCGCGACGAACAACCCCGAGGTCCACCTCATGGTCGTGCTCGTCGACGAACGGCCCGAAGAGGTCACCGACATGCAGCGCACCGTCAAGGGCGAGGTCATCGCCTCGACCTTCGACCGCCCCGCCGAAGACCACACGACGGTCGCCGAGCTCGCGATCGAGCGCGCCAAGCGTCTCGTCGAGCTGGGCCGCGACGTCGTCGTGCTGCTCGACTCGATCACGCGCCTCGGTCGCGCCTACAACGTCTCGGCCCCGACGAGCGGCCGCGTGCTGTCCGGCGGCGTCGACGCGTCGGCGCTGTACCCGCCCAAGCGCTTCTTCGGTGCCGCGCGCAACATCGAGAACGGCGGATCGCTCACGATCCTCGCGACGGCGCTCGTCGAGACCGGCTCGAAGATGGACGATGTCATCTTCGAGGAGTTCAAGGGCACCGGCAACAGCGAGCTGCGTCTGAGCCGCCAGCTGGCCGACAAGCGCATCTTCCCGGCGGTCGACGTCAACGCGTCGTCCACGCGTCGCGAAGAGATGCTGCTGAGCCCCGACGAGGTCAAGATCACCTGGAAGCTGCGTCGCGCCCTCGCGGGCCTCGACCCGCAGCAGGCGCTCGAGGTCGTGCTCGGCAAGCTCAAGGAGACCTCGAGCAACGTCGAGTTCCTCGTGCAGATGCAGAAGTCGATCCCGGCTCCTGCCGCCGGCGGCCACAGCCACGGGCACGAGAACAGCATCCGCTGA
PROTEIN sequence
Length: 685
VESLSEIQSETDEAPREDAAAQEVVNTESPVAEVVTEAAEAVVEPAAEAEAPVEEPAAEEAAAEEAAVEAPAEQPAAEVVAEAAPEAVVEPEVAAESAPEAAVEPAAEVLEAPPVKAPRKRAPRRAKSTDVLAAEAPAADAAPVDAPAEAEAAVPAEEPAAEASAVEASDAPAEGDAAAAPVDGDAAAPVAEGAETPAESAEAAAEGAEAPAESETPTRSRSRSRSRSRSRGQKTDGGQNNTQNGQGGQNAPAADEAKSDSDDEQAQGRGRQRNKRRPQGQGGDEFETEIGEDDILIPIAGILDVLDNYAFVRTTGYLPGTSDVYVSLGQVKKYNLRKGDAVVGAIKQPREGEQSSRQKYNALVKVDAINGLSVDDAANRVEFGKLTPLYPQDRLRLETAPEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIANAIATNNPEVHLMVVLVDERPEEVTDMQRTVKGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRAYNVSAPTSGRVLSGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDDVIFEEFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSPDEVKITWKLRRALAGLDPQQALEVVLGKLKETSSNVEFLVQMQKSIPAPAAGGHSHGHENSIR*