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scnpilot_p_inoc_scaffold_1271_1

Organism: SCNpilot_P_inoc_Microbacterium_69_20

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 1..2835

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 944.0
  • Bit_score: 1809
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=2 Tax=Microbacterium RepID=H8E542_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 944.0
  • Bit_score: 1801
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 944.0
  • Bit_score: 1738
  • Evalue 0.0

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2835
ATCAACCGCAACAACCGCCTCCGTCGCCTGATCGACCTCGGTGCCCCCGAGATCATCGTCAACAACGAGAAGCGCATGCTGCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGCCGTGGTCGCCCCGTCACCGGTACCGGCAACCGTGCCCTGAAGTCGCTGTCCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGACTACTCGGGCCGCTCGGTCATCATCGTCGGTCCGCAGCTGAAGCTGCACCAGTGTGGTCTGCCCAAGCAGATGGCGCTCGAGCTCTTCAAGCCGTTCGTGATCAAGCGCCTGATCGACCTCGGTCACTCGCAGAACATCAAGGCCGCCAAGCGCGCCGTCGAGCGCACGCGTCCCGAGGTCTGGGACGTGCTCGAGGAGATCATCCGCGAGCGCCCCGTGCTGCTGAACCGTGCACCCACGCTGCACCGCCTCGGCATCCAGGCCTTCGAGCCTCAGCTCGTCGAGGGCAAGGCCATCCAGCTGCACCCGCTCGTGTGTGCGGCGTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTGCACCTGCCGCTGTCGGTCGAGGCTCAGGCCGAGGCCCGCGTGCTGATGCTCGCGTCGAACAACATCCTCAAGCCGTCTGACGGCCGCCCGGTCACCCTGCCCTCGCAGGACATGATCATCGGCCTGCACCACCTGACCACGGTCAAGGAGGGTGCTGCCGGTGAGGGTCGCGTGTTCGGTTCGGTCGGCGAGGCGATCCTGGCCAAGGACGAGGGCACCCTCGACCTGCAGGCCAAGGTCCGCATCCGCATCCCGGGTCTGTCGTTCCTCGAGGGCGAAGCGCCCGAGGGCTACGACCGTCACGGCCTCGTGGACGCGTCGCTCGGTCAGGCGATCTTCAACGACACGCTGCCCAAGGGCTACCCGTTCGTGCGCGAGCAGGCTGACAAGGGCAAGCTGTCGCAGATCGTCAACAAGCTCGCCGAGGAATACCCCAAGGTCGAGGTCGCCGCGTCGCTTGACCGCATCAAGGATGCCGGGTTCTACTGGGCCACGCGCTCGGGCGTCACGGTCGCACTGAGCGACATCCTGACCCCGCCGAACAAGGGCGAGATCATCGCCAAGTTCGAGCAGCAGGCGCAGAAGGTCCAGGGCCAGTTCGAGAAGGGTCTCGTGACCGACGCCGAGCGTCGTCAGGAGCAGATCAAGATCTGGACCGAGGCGACCGACGAGGTGCAGGCCGCGATGAAGGCCAACTTCCCCGCCGACAACACCATCAACCGCATGGTGAGCTCGGGCGCCCGTGGTAACTGGCTGCAGATCCGCAACATCGCGGGCATCCGAGGCCTGGTCAACAACACCAAGGGTGAGATCATGCCCCGCCCGATCATCTCCTCGTACCGCGAGGGGCTGTCGGTTGCGGAGTACTTCACCGCGACGCACGGTGCCCGTAAGGGTCTGGCCGACACGGCCCTCCGTACCGCCGACTCGGGTTACCTGACGCGACGCCTCGTCGACGTCTCGCAGGATGTCATCATCCGCGAGGACGACTGTGGCACGACGAAGGGCCTCGAGTTCACGATCGCCGCTCCGAATGCCACCGGCACGCTGGTGCGCGACGCGAACGTCGAGAACTCGGTGTTCGCCCGTACCCTGGCGGCCGACGTGGTCGCGCCGTCGGGCGAGGTCGTGGCATCCGCCGGTGACGACGTGGGTGACGTGCTCATCGACAAGCTCGTCGAGGCCGGCGTCGAGACCATCAAGGTCCGCTCGGTGCTCACGTGTGACTCGGCGGTCGGCGTCTGCGCGAAGTGCTACGGCCGTTCGCTCGCGACCGGCAAGCTCGTCGACATCGGTGAGGCCGTCGGCATCATCGCGGCCCAGTCGATCGGTGAGCCCGGCACGCAGCTGACGATGCGTACCTTCCACACAGGTGGTTCGGCTTCTGCCGACGACATCACCCAGGGTCTGCCGCGTGTGCAGGAGCTGTTCGAGGCCCGTACCCCCAAGGGTGCGTCCCCGATCGCCGAGGCTGACGGTCGCATCACGATCGATGAGACCGACAAGGCGAAGAAGGTCATCCTCACGCCCGACAACGGCGACGAGCCGCACGTCTACCCGGTGCTCAAGCGCGCCACGCTGCTGGTCGAGGACGGCCAGCACGTGACGGTCGGCCAGCCGATCCTGGTGGGCACGCTCGACCCCAAGGAGGTCATGCGTGTGCAGGGTGCCCGCGAGGTGCAGAAGTACCTCGTCGGCGGCGTGCAGGGCGTGTACCGCTCGCAGGGTGTGCCGATCCACGACAAGCACATCGAGGTCATCGTCCGTCAGATGCTGCGGAAGGTCACCGTGGTCGACCACGGCGACACGACGCTGCTGCCGGGTGAGCTGGTCGACTTCAAGCGCTACCAGCAGATCAACCGCGAGGCAGTCGCCGAGGGCAAGCGCCCCGCGTCGGGTCGTCCCGAGCTGATGGGTATCACGAAGGCGTCGCTCGCGACCGAGTCGTGGCTGTCGGCCGCGTCGTTCCAGGAGACCACCCGCGTTCTGACGCAGGCGGCCATGGAGGGCAAGAGCGACCCGCTCGTCGGCCTCAAGGAGAACGTCATCATCGGAAAGCTCATCCCCGCCGGAACCGGTCTTGCGAAGTACCGCAACGTCACGGTCGAGGCGACGGAAGAGGCCAAGAGCGAGCGGTACCCCAACCGCATCTTCGCCTCGGACGGCGCCTACAGCGACGCCGACCTGAGCTACGTCGACTTCGACAGCTTCTCGACGGACGACTTCACGCCCGGTACGTACAACTGA
PROTEIN sequence
Length: 945
INRNNRLRRLIDLGAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERTRPEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQMAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKEGAAGEGRVFGSVGEAILAKDEGTLDLQAKVRIRIPGLSFLEGEAPEGYDRHGLVDASLGQAIFNDTLPKGYPFVREQADKGKLSQIVNKLAEEYPKVEVAASLDRIKDAGFYWATRSGVTVALSDILTPPNKGEIIAKFEQQAQKVQGQFEKGLVTDAERRQEQIKIWTEATDEVQAAMKANFPADNTINRMVSSGARGNWLQIRNIAGIRGLVNNTKGEIMPRPIISSYREGLSVAEYFTATHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTTKGLEFTIAAPNATGTLVRDANVENSVFARTLAADVVAPSGEVVASAGDDVGDVLIDKLVEAGVETIKVRSVLTCDSAVGVCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELFEARTPKGASPIAEADGRITIDETDKAKKVILTPDNGDEPHVYPVLKRATLLVEDGQHVTVGQPILVGTLDPKEVMRVQGAREVQKYLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTVVDHGDTTLLPGELVDFKRYQQINREAVAEGKRPASGRPELMGITKASLATESWLSAASFQETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLAKYRNVTVEATEEAKSERYPNRIFASDGAYSDADLSYVDFDSFSTDDFTPGTYN*