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scnpilot_p_inoc_scaffold_3077_15

Organism: SCNpilot_P_inoc_Microbacterium_69_20

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38
Location: 11297..11584

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000369AE1A similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 95.0
  • Bit_score: 186
  • Evalue 9.20e-45
Tyrosine recombinase XerC {ECO:0000313|EMBL:KJL23768.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 95.0
  • Bit_score: 188
  • Evalue 5.70e-45
integrase/recombinase similarity KEGG
DB: KEGG
  • Identity: 70.2
  • Coverage: 84.0
  • Bit_score: 119
  • Evalue 5.00e-25

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 288
GTGACGGAACGCCGCACCCGACTGTCGGCCGGCTATCTCGACCGGCGGTTCGCGGAGCTGCGGGACGAGGCCGGCTTGTCAAAGGCCCTGACTCTGCACAGCCTCCGGCATTCGTACGTGACGCACCTGCTCGAGTTCGGCTACGCCGACCGATTCGTCCAGGAGCAGGTCGGGCACATGCATGCTTCGACGACCTCGATCTACGCCTCCGTCAGCTCGGACTTCAAGAACCGGGTACTCGCGGACGCATTGAAGGCCCTCATCGAAGGAGAAGCAGATGACCGTTGA
PROTEIN sequence
Length: 96
VTERRTRLSAGYLDRRFAELRDEAGLSKALTLHSLRHSYVTHLLEFGYADRFVQEQVGHMHASTTSIYASVSSDFKNRVLADALKALIEGEADDR*