ggKbase home page

scnpilot_p_inoc_scaffold_117

Search features with annotation key words

Displaying items 91-120 of 240 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_117_91
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(83567..83953)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N856_MICTS
Uncharacterized protein {ECO:0000313|EMBL:KEP74065.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hypothetical protein
scnpilot_p_inoc_scaffold_117_92
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84018..85109
DNA (1092bp) protein (364aa)
geranylgeranyl pyrophosphate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6F63B rbh
geranylgeranyl pyrophosphate synthase
Geranylgeranyl pyrophosphate synthase {ECO:0000313|EMBL:BAJ73077.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceu
scnpilot_p_inoc_scaffold_117_93
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(85129..85473)
DNA (345bp) protein (115aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CF37A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73078.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
scnpilot_p_inoc_scaffold_117_94
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

85611..86600
DNA (990bp) protein (330aa)
peptidoglycan-binding protein LysM n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CB1BB rbh
LysM repeat rbh
FOG: LysM repeat {ECO:0000313|EMBL:BAJ73079.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_117_95
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86655..88589
DNA (1935bp) protein (645aa)
serine/threonine protein kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034725CD rbh
serine/threonine protein kinase rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:BAJ73080.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (str
scnpilot_p_inoc_scaffold_117_96
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88700..90037)
DNA (1338bp) protein (446aa)
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Microbacterium sp. B19 RepID=UPI000349FB74 rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:KEP74365.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium s
aroH; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
scnpilot_p_inoc_scaffold_117_97
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(90047..90760)
DNA (714bp) protein (238aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C63FB rbh
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:BAJ73082.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
scnpilot_p_inoc_scaffold_117_98
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(90763..91698)
DNA (936bp) protein (312aa)
glucokinase n=1 Tax=Microbacterium sp. B19 RepID=UPI000347CEEA rbh
transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:BAJ73083.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testace
scnpilot_p_inoc_scaffold_117_99
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

91859..93685
DNA (1827bp) protein (609aa)
long-chain fatty acid--CoA ligase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003477A90 rbh
fadD; long-chain acyl-CoA synthetase
Long-chain acyl-CoA synthetase {ECO:0000313|EMBL:BAJ73084.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (stra
scnpilot_p_inoc_scaffold_117_100
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(93778..94269)
DNA (492bp) protein (164aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
peptide deformylase n=1 Tax=Microbacterium sp. B19 RepID=UPI000344E2E5 rbh
N-formylmethionyl-tRNA deformylase
scnpilot_p_inoc_scaffold_117_101
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(94266..96380)
DNA (2115bp) protein (705aa)
ATPase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N866_MICTS rbh
ATPase
ATPase {ECO:0000313|EMBL:BAJ73086.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_117_102
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(96428..99835)
DNA (3408bp) protein (1136aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" s
Pyruvate carboxylase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N867_MICTS rbh
pycA; pyruvate carboxylase
scnpilot_p_inoc_scaffold_117_103
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99905..100717
DNA (813bp) protein (271aa)
chromosome partitioning ATPase n=1 Tax=Microbacterium sp. B19 RepID=UPI000347A44B rbh
parA; ATPase
ATPase {ECO:0000313|EMBL:BAJ73088.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_117_104
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100866..101408)
DNA (543bp) protein (181aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003470E87 rbh
Transcriptional regulator {ECO:0000313|EMBL:KEP74674.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_117_105
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(101505..102191)
DNA (687bp) protein (229aa)
MerR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B35A0D rbh
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:BAJ73090.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum
scnpilot_p_inoc_scaffold_117_106
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(102191..102685)
DNA (495bp) protein (165aa)
transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D6A87 rbh
FHA domain
FOG: FHA domain {ECO:0000313|EMBL:BAJ73091.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_p_inoc_scaffold_117_107
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

102943..103584
DNA (642bp) protein (214aa)
copper resistance protein CopC n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B73B2 rbh
hypothetical protein
Uncharacterized protein, homolog of Cu resistance protein CopC {ECO:0000313|EMBL:BAJ73092.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source
scnpilot_p_inoc_scaffold_117_108
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

103594..104991
DNA (1398bp) protein (466aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacter
Dihydrolipoyl dehydrogenase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N873_MICTS rbh
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component
scnpilot_p_inoc_scaffold_117_109
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(105051..105692)
DNA (642bp) protein (214aa)
adenylate cyclase n=1 Tax=Microbacterium sp. B19 RepID=UPI000345039C rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ73094.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
scnpilot_p_inoc_scaffold_117_110
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(105689..105916)
DNA (228bp) protein (76aa)
response regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B6E1B8
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:BAJ73095.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microba
scnpilot_p_inoc_scaffold_117_111
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

105985..106740
DNA (756bp) protein (252aa)
glutamine amidotransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B4290 rbh
GMP synthase - Glutamine amidotransferase domain
GMP synthase-Glutamine amidotransferase domain {ECO:0000313|EMBL:BAJ73096.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium
scnpilot_p_inoc_scaffold_117_112
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(106754..107461)
DNA (708bp) protein (236aa)
NAD(P)H-hydrate epimerase {ECO:0000255|HAMAP-Rule:MF_01966}; EC=5.1.99.6 {ECO:0000255|HAMAP-Rule:MF_01966};; NAD(P)HX epimerase {ECO:0000255|HAMAP-Rule:MF_01966}; TaxID=979556 species="Bacteria; Actin
NAD(P)H-hydrate epimerase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=NNRE_MICTS rbh
hypothetical protein rbh
scnpilot_p_inoc_scaffold_117_113
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(107490..108422)
DNA (933bp) protein (311aa)
ribonuclease BN n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D2AF8 rbh
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:BAJ73098.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain S
scnpilot_p_inoc_scaffold_117_114
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108629..109081)
DNA (453bp) protein (151aa)
peptidase A24 n=1 Tax=Microbacterium sp. B19 RepID=UPI000347B4BB
type II secretory pathway, prepilin signal peptidase PulO
Type II secretory pathway, prepilin signal peptidase PulO {ECO:0000313|EMBL:BAJ73099.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Mic
scnpilot_p_inoc_scaffold_117_115
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109086..109382)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034607AA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ73100.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB
scnpilot_p_inoc_scaffold_117_116
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109460..110029)
DNA (570bp) protein (190aa)
DNA glycosylase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B56490 rbh
G:T/U mismatch-specific DNA glycosylase
G:T/U mismatch-specific DNA glycosylase {ECO:0000313|EMBL:BAJ73102.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testac
scnpilot_p_inoc_scaffold_117_117
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

110087..110884
DNA (798bp) protein (266aa)
hydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B4F533 rbh
Hydrolase {ECO:0000313|EMBL:KEP74130.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
hydrolase or acyltransferase
scnpilot_p_inoc_scaffold_117_118
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(110915..112966)
DNA (2052bp) protein (684aa)
4-amino-4-deoxy-L-arabinose transferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C09FE rbh
4-amino-4-deoxy-L-arabinose transferase rbh
4-amino-4-deoxy-L-arabinose transferase {ECO:0000313|EMBL:BAJ73104.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testac
scnpilot_p_inoc_scaffold_117_119
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(113046..114722)
DNA (1677bp) protein (559aa)
Endoglucanase {ECO:0000256|RuleBase:RU361153}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361153};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="
Endoglucanase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N885_MICTS rbh
endoglucanase
scnpilot_p_inoc_scaffold_117_120
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(114773..116425)
DNA (1653bp) protein (551aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B705D9 rbh
regulator of polyketide synthase expression
Regulator of polyketide synthase expression {ECO:0000313|EMBL:BAJ73106.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium te
Displaying items 91-120 of 240 in total

View Taxonomy