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scnpilot_p_inoc_scaffold_117_73

Organism: SCNpilot_P_inoc_Microbacterium_70_36

near complete RP 51 / 55 MC: 5 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: comp(65278..66201)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.; similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 307.0
  • Bit_score: 579
  • Evalue 2.90e-162
RNA pseudouridine synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003469449 similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 307.0
  • Bit_score: 609
  • Evalue 1.40e-171
  • rbh
rlu; pseudouridylate synthase, 23S RNA-specific similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 307.0
  • Bit_score: 579
  • Evalue 5.70e-163

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 924
ATGGATTCGCGGAGTCTTCCCGTCCCGGACGGGCTCGAAGGGACGCGCGTCGACCAGGCCCTGGCCAAGATGCTGGGGTTCTCGCGGACGTTCGCGGCCGAGGTCGCCGACGCGGGCGGGGTGAGTGTCGACGGGCGCACGGTCGGTCGATCCGATCGTCTGCGCGCCGGTACGTGGCTGAGCGTCGAGTGGGAGCCCAGGCGCGATCCGGAAGTCGTGCCCGTCGCCGTCCCCGACCTCGGCATCGTGTGGGACGACGACGACATCGTCGTCGTCGACAAGCCGTCCGGCGTCGCGGCGCACCCCTCCGTCGGCTGGGACGGCCCCACGGTTCTCGGCGCCCTCGCCGCCGCGGGATTCCGGATCGCCACCAGCGGTGCCGCGGAGCGTCGCGGCATCGTGCACCGTCTCGATGTGGGCACGAGCGGCCTCATGGTCGTCGCGAAGACCGAGCGCGCGTACACGGTGCTGAAGGCCGCGTTCAAGGACCGCACGGTCGACAAGATCTATCACGCCGTGGTCCAGGGGCATCCCGATCCGCTGGCCGGCACGATCGACGCGCCGATCGGTCGGCATCCCCACCACTCGTGGAAGTTCGCCGTCACGCCCGACGGCAAGGACTCCGTGACGCACTACGAGACGCTCGAGGCGTTCCCCCGGGCCTCTCTCCTCGAGATCCACCTCGAGACCGGCCGCACGCACCAGATCCGCGTCCACATGGCGGCCCACCGGCACCCGTGCGCGGGCGACCCGCTGTACGGCGCCGACCCCACGCTGTCAGCCCGGCTCGGCCTCACACGCCAGTGGCTGCACGCCCACCGGCTCGCCTTCACCCACCCGGCGACGGGGGAATGGGTGAGCTTCGAGTCGTCCTACCCGACCGATCTGCAGCACGCACTCGACGTGCTGCGCGACGGCGTCTGA
PROTEIN sequence
Length: 308
MDSRSLPVPDGLEGTRVDQALAKMLGFSRTFAAEVADAGGVSVDGRTVGRSDRLRAGTWLSVEWEPRRDPEVVPVAVPDLGIVWDDDDIVVVDKPSGVAAHPSVGWDGPTVLGALAAAGFRIATSGAAERRGIVHRLDVGTSGLMVVAKTERAYTVLKAAFKDRTVDKIYHAVVQGHPDPLAGTIDAPIGRHPHHSWKFAVTPDGKDSVTHYETLEAFPRASLLEIHLETGRTHQIRVHMAAHRHPCAGDPLYGADPTLSARLGLTRQWLHAHRLAFTHPATGEWVSFESSYPTDLQHALDVLRDGV*