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scnpilot_p_inoc_scaffold_184_28

Organism: SCNpilot_P_inoc_Microbacterium_70_36

near complete RP 51 / 55 MC: 5 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 13893..14882

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 329.0
  • Bit_score: 624
  • Evalue 6.40e-176
DNA-directed RNA polymerase subunit alpha n=1 Tax=Microbacterium sp. B19 RepID=UPI000345F016 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 329.0
  • Bit_score: 634
  • Evalue 7.50e-179
  • rbh
rpoA; DNA-directed RNA polymerase, alpha subunit/40 kD subunit similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 329.0
  • Bit_score: 624
  • Evalue 1.30e-176

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 990
GTGCTCATCGCACAGCGTCCCACTCTGACCGAGGAGAAGATCGGGGAGTTCCGCAGCCGTTTCGTCATCGAGCCGCTCGAGCCCGGCTTCGGTTACACGATCGGCAACGCGCTGCGTCGCAGCCTCCTGTCGTCGATCCCCGGCGCGGCCGTCACGAGCATCCGCATCGATGGCGTCCTGCACGAGTTCAGCACCATCCCGGGCGTGAAGGAAGACGTCACCGAGATCATCCTGAACATCAAGCAGCTCGTCGTCTCGAGCGAGCGCGACGAGCCCATCACGGCCTACCTGCGCAAGACGGGTGCCGGCGAGGTCACGGCGGCGGACATCTCCGCTCCCGCCGGCGTCGAGGTGCACAACCCGGAGCTCGTCATCGCGACGCTCAACGACACCGCGAAGTTCGAGCTCGAGCTCACCATCGAGCGCGGCCGCGGCTACGTCTCGGCGACCCAGAACCGCAACGAGTACGCCGAGGCCGGTCAGATCCCGATCGACTCGATCTACTCGCCCGTTCTCAAGGTCAGCTACCGCGTCGACGCGACCCGTGCCGGCGAGCGTACCGACTTCGACAAGCTCGTCCTGGACGTCGAGTCGAAGCCGTCGATCGCCCCGCGTGACGCGGTGGCGTCGGCCGGTCGCACCCTCACGGAGCTGTTCGGTCTCGCGCGCGAGCTGAACGTCGAGGCCGAGGGCATCGAGATCGGCCCCGCGCCGGTCGAGACCGTCCTCTCGAACGAGCTGTCGATGCCGATCGAAGACCTCGACCTCTCGGTGCGCTCGTACAACTGCCTCAAGCGCGAGGGCATCAACACCGTTTCGGAGCTGGTCGCCCTCTCCGAGACCCAGCTGATGAACATCCGCAACTTCGGTCAGAAGTCGGTCGACGAGGTGCGCGACAAGCTCACCTCCCTTGGCCTGTCGCTCAAGGACTCGGTGCCCGGCTTCGACGGCGCCCAGTTCTTCGGCGGCTACGACGACGAGACCGTCTGA
PROTEIN sequence
Length: 330
VLIAQRPTLTEEKIGEFRSRFVIEPLEPGFGYTIGNALRRSLLSSIPGAAVTSIRIDGVLHEFSTIPGVKEDVTEIILNIKQLVVSSERDEPITAYLRKTGAGEVTAADISAPAGVEVHNPELVIATLNDTAKFELELTIERGRGYVSATQNRNEYAEAGQIPIDSIYSPVLKVSYRVDATRAGERTDFDKLVLDVESKPSIAPRDAVASAGRTLTELFGLARELNVEAEGIEIGPAPVETVLSNELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDKLTSLGLSLKDSVPGFDGAQFFGGYDDETV*