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scnpilot_p_inoc_scaffold_184_30

Organism: SCNpilot_P_inoc_Microbacterium_70_36

near complete RP 51 / 55 MC: 5 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 15571..16428

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy similarity UNIPROT
DB: UniProtKB
  • Identity: 81.4
  • Coverage: 285.0
  • Bit_score: 470
  • Evalue 1.30e-129
tRNA pseudouridine synthase A n=1 Tax=Microbacterium sp. B19 RepID=UPI0003472EB8 similarity UNIREF
DB: UNIREF100
  • Identity: 86.3
  • Coverage: 285.0
  • Bit_score: 495
  • Evalue 2.80e-137
  • rbh
truA; pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 80.4
  • Coverage: 285.0
  • Bit_score: 462
  • Evalue 9.50e-128

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Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 858
GTGCGTATCCGCCTCGACATCGCCTACGACGGCACACACTTCCGCGGATGGGCGCGTCAGCCTGGTCTGCGGACGGTCCAGGGCACACTCGAGACGGCGCTGGGCCGCATCGTCGGAGGGGAACCGCGCCTGGTCGTGGCCGGCCGGACGGATGCCGGGGTGCACGCCTCCGGGCAGGTCGCGCACATCGATCTCGACGAGACGCAGGTCGCCCGTCTCCCTCGTCGACGTCGAGAGGGCGACGAGCCGGATGGCGTCGCGGCACTCGCGGGTCGCATCAGGGGGGTGCTGGGCGCCTACCCCGATGTCACCGTGAATCGCACGGTTCGGGCGCCCGACGGATTCGACGCGCGCTTCTCGGCCGTGTGGCGCCGCTATGTCTACCGGATCGCGGATCTCTCGACCGGGTACGACCCGCTCGAGCGGGCGCGCACGACCACCGTGAAAGCGCATCTGGACGTCGAGGCGATGGATGCCGCGGCGCGGAGTCTCATCGGCCTCCACGATTTCGCGGCGTACTGCAAGGCACGTGAGGAGGCGACCACCATCCGGACGCTGCTGGAGTTCGGCTGGCGTCGTGACCCGGAGGGTGCGCTCATCGCCCATGTGCGCGCCGACGCGTTCTGCCACAGCATGGTGCGCGCCCTGGTCGGTGCGTGCGTGGCCGTCGGCGAGGGGCGGATCGACCGCGAACGGGTCGTCGCGATCCGCGACGCGGGTGCCCGCCTCCCTGACACGAAGGTCCTCGCCGCGCGCGGGCTCGTGCTGGCCGAGGTGGGGTACCCCGCCGATGAACTGCTCGCATCGCGAGCCGAGCAGACCCGGAACCGACGCGATGCGGACGACATCGGTTCCTGA
PROTEIN sequence
Length: 286
VRIRLDIAYDGTHFRGWARQPGLRTVQGTLETALGRIVGGEPRLVVAGRTDAGVHASGQVAHIDLDETQVARLPRRRREGDEPDGVAALAGRIRGVLGAYPDVTVNRTVRAPDGFDARFSAVWRRYVYRIADLSTGYDPLERARTTTVKAHLDVEAMDAAARSLIGLHDFAAYCKAREEATTIRTLLEFGWRRDPEGALIAHVRADAFCHSMVRALVGACVAVGEGRIDRERVVAIRDAGARLPDTKVLAARGLVLAEVGYPADELLASRAEQTRNRRDADDIGS*