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scnpilot_p_inoc_scaffold_481_6

Organism: SCNpilot_P_inoc_Microbacterium_70_36

near complete RP 51 / 55 MC: 5 BSCG 50 / 51 MC: 2 ASCG 13 / 38
Location: 3941..4834

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 296.0
  • Bit_score: 474
  • Evalue 1.30e-130
tRNA pseudouridine synthase B n=1 Tax=Microbacterium sp. B19 RepID=UPI000347A30A similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 297.0
  • Bit_score: 512
  • Evalue 3.90e-142
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 84.1
  • Coverage: 296.0
  • Bit_score: 474
  • Evalue 2.50e-131

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Taxonomy

Microbacterium testaceum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGGCACGCCCCGGCATCCTCCTCGTCGACAAGCCCGGAGGCATCACCAGCCATGACGTCGTGGCGCGCGCGCGTCGCGCCCTGGGCACCCGCAAGATCGGCCACGCGGGCACGCTCGACCCGATGGCGACGGGGTTGCTCGTCCTGGGCGTCGAGGGCGCGACGAGGCTGCTGACCTACGTCGTCGGCGCCGACAAGACGTACGAGGCGACCGTGCTGCTCGGGATCTCGACCGACAGCGACGACGCCGACGGCGAGGAGACGGCCCGGGCGGATGCCACGACCGTCGCCGCCGTGACCGATGCGGCGATCGCCGCCGGGATCGCCGACCTGAGCGGCGAGATCGACCAGGTGCCGAGCACGGTCTCGGCGATCAAGGTGAACGGGCGCCGGGCGTACGACCTCGCCCGGGCGGGCGAGACGGTGGAGCTGAAGGCCCGCCGCGTGACGGTGTCCCGTTTCGAGGTCCGGGCCGCGCGCCGGGAGGCGGCGACGATCGCGCTCGACGTCGTCGTGGACTGCTCGAGCGGCACTTACATCCGGGCGCTCGCCCGTGACCTCGGCGCGGCGCTCGGGGTCGGCGGTCACCTGACCGCTCTCCGCCGGACCCGCATCGGGGCGTTCGACGTCGCCGCCGCGGTCTCCGTCGACGCCATCGCCGAGACCGTGCTCGTGAAACCGGCGACCGCCGCGGCCGCGGTCGTCGGTGCCCTCGCGGTCGGGGCCGAGGAGGCTCGCGACCTCCGCCACGGCAAGCGCATCGACGGCGGCGGTCGGTTGACGGGCGAGCGCGCCGCCGCGATCGATCCCGACGGGCGTCTGGTGGGGATCGTCGAGCGCCGCGGCACTCAGCTCAAGAGCGTCATGAACATGCCCGAGGAGGTCGCGGGATGA
PROTEIN sequence
Length: 298
MARPGILLVDKPGGITSHDVVARARRALGTRKIGHAGTLDPMATGLLVLGVEGATRLLTYVVGADKTYEATVLLGISTDSDDADGEETARADATTVAAVTDAAIAAGIADLSGEIDQVPSTVSAIKVNGRRAYDLARAGETVELKARRVTVSRFEVRAARREAATIALDVVVDCSSGTYIRALARDLGAALGVGGHLTALRRTRIGAFDVAAAVSVDAIAETVLVKPATAAAAVVGALAVGAEEARDLRHGKRIDGGGRLTGERAAAIDPDGRLVGIVERRGTQLKSVMNMPEEVAG*