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scnpilot_p_inoc_scaffold_6_15

Organism: SCNpilot_P_inoc_Niastella_45_30

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(14119..15114)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PQL4_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 23.0
  • Coverage: 322.0
  • Bit_score: 117
  • Evalue 3.10e-23
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 23.0
  • Coverage: 322.0
  • Bit_score: 117
  • Evalue 8.70e-24
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHQ30950.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 24.9
  • Coverage: 338.0
  • Bit_score: 96
  • Evalue 7.90e-17

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Taxonomy

Mucilaginibacter paludis → Mucilaginibacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 996
ATGCTGTCACCCTTGAAAATTCACTTCCCTCCGGAACTATGTAAGAATTTACAGATCACTCATACCTGTCCTGCTGAATTTAAATACAGCATTTCCTTTGCTGAATGTAACCGCACAAGATGTGACCTGGGCGATTTTATAATACAATCTATTAGCGGAGATGATTATTGGATAGAGCTTTGGACATTTTTGGTCAAAAAGGAAGGGTATTTAGATATAGCTGTAAATGAACCATCAATTTGCATAGCATTATTTTTGAAAGGCAACCTGGTCGGCCATCTTTCAGGGCATGGCAAGGTCAATACGCTGGCAAATACTTACAATATTTTTTATTTACCAACCGGAACTCATAAAGTGAGCCTGCGCATTGAAGATTACACATTGCTCTATATTGTTTTGCCTAAGAATTTCCTGAAGGGGATGGCTGACGAGCATTCACAAATGCAGGAAATAGTTACTCGCTTATCCAAAAGAGTTGAAAGCGGCACATTGCTTACGAGTTTTCCTTTGCCTCATAGTGTTTGGAGGATATTAAAAAGAATGGAGCGACTGCATAAGAAAGGAGCTGCATTGGATTTTGCTTTGCGGCAATACATTCTTGAAATATTGGCATTATATAACGAGCAATATAAACTTGGAAGCCCGGCATCCAGAATATATTTATCCGCCAGGGAAAAATCTTTTGCAGTGAGAGAATATATTTTGTCCAATCTCGGAGACGCAAAACTCGGCGGTTTAAATCAACTCGCATCCGATTTCCATATTTCTCCAAAGACACTTACAAAACAGTTCAAAAGTCTTACAGGCAAAACTGTTCCGCAGTTTATTAACGATGAAAGATTAGAATGGGCGAGGCGATTATTAAATGATAAAAAGCTGCCAGTATTTGAAGTTACCCAAGTGATAGGGTTTTCCGATACAGCAAATTTTATAAGAAGATTTAAAAAGAAATATGGTATTTCCCCTGGTGGTCAGCATAGCAAAAAGAAAAAATGA
PROTEIN sequence
Length: 332
MLSPLKIHFPPELCKNLQITHTCPAEFKYSISFAECNRTRCDLGDFIIQSISGDDYWIELWTFLVKKEGYLDIAVNEPSICIALFLKGNLVGHLSGHGKVNTLANTYNIFYLPTGTHKVSLRIEDYTLLYIVLPKNFLKGMADEHSQMQEIVTRLSKRVESGTLLTSFPLPHSVWRILKRMERLHKKGAALDFALRQYILEILALYNEQYKLGSPASRIYLSAREKSFAVREYILSNLGDAKLGGLNQLASDFHISPKTLTKQFKSLTGKTVPQFINDERLEWARRLLNDKKLPVFEVTQVIGFSDTANFIRRFKKKYGISPGGQHSKKKK*