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scnpilot_p_inoc_scaffold_34_6

Organism: SCNpilot_P_inoc_Niastella_45_30

near complete RP 53 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 13 / 38
Location: comp(8948..9808)

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Flavobacterium sp. F52 RepID=J0RPV2_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 285.0
  • Bit_score: 217
  • Evalue 1.90e-53
AraC family transcriptional regulator {ECO:0000313|EMBL:KFC59794.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flav similarity UNIPROT
DB: UniProtKB
  • Identity: 39.9
  • Coverage: 283.0
  • Bit_score: 228
  • Evalue 1.20e-56
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.0
  • Coverage: 255.0
  • Bit_score: 187
  • Evalue 5.90e-45

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Taxonomy

Flavobacterium sp. EM1308 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 861
TTGCGCGTTATCCAAACTCATATTACCAGTAGTTTGCAGATCCCTTTTGCAGTGATACGAAAGAAAGGAACTGGCTTCAGCTCCTGCCTGCATGCGCATCCGGAATTGGAGCTGGTGCATGTACGGGCAGGCAATGGACGACGCATCGTGGGTCACCTGATTGCGCCGTTTCAGGAAGGAGATATGGTATTACTCGGCAGTATGCTACCCCATCGGTGGATATATGAGCCCACGGGCAATCATCAACCCGCCTCTACGGTTCTTTATTTCAATACCGACACACTTGCCGGCTCTTTTTATGAAATGAACGAATGCCGTCCGCTACAGGATTTACTACAGCGTGCCACGCAGGGCTTATGTATAAAAGGAAAAACCAGGCAACTGGTTGCCAGCCGACTCGAAAAACTGAGCCGGCTGAAAGGACTTCCTGCCTTCACCGGCATTCTTGACCTGCTGCAACTGCTGGCCACCAGCAGTGAACTGGAATCGCTCGCTGCCGGCACGCAGGAAGCCAGTACATTCGCTACTGTGACTGACCGGCTCAGCGAAGTCTATGAATATATTGCCGCCCACTATCATGAAGAGCTCACACTATCGCGTGTAGCAGCTGTTGCACATCTGAGTGAAACAGCGTTCTGCCGATTGTTTCGTCAGCGTACGCAAAATCATTTCACCGCTTATCTCAATGAAATAAGACTGCAGCATGCCTGCCATCGCCTGCAGTCAACGGATGAGCCCATCAGTCTCATAGCAGAAGCCTGTGGTTTCAAGACCGTTTCTAATTTCAATAAATGTTTTAAAAAAGGAAGAAAGAGCTCGCCGTCAGCGTACAGACACAGCTTTCAGCAATTAGCACAGTGA
PROTEIN sequence
Length: 287
LRVIQTHITSSLQIPFAVIRKKGTGFSSCLHAHPELELVHVRAGNGRRIVGHLIAPFQEGDMVLLGSMLPHRWIYEPTGNHQPASTVLYFNTDTLAGSFYEMNECRPLQDLLQRATQGLCIKGKTRQLVASRLEKLSRLKGLPAFTGILDLLQLLATSSELESLAAGTQEASTFATVTDRLSEVYEYIAAHYHEELTLSRVAAVAHLSETAFCRLFRQRTQNHFTAYLNEIRLQHACHRLQSTDEPISLIAEACGFKTVSNFNKCFKKGRKSSPSAYRHSFQQLAQ*