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scnpilot_p_inoc_scaffold_67_27

Organism: SCNpilot_P_inoc_Niastella_39_19

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(28470..29021)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Bacteroides sp. CAG:1060 RepID=R5BYX2_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 165.0
  • Bit_score: 156
  • Evalue 2.50e-35
sigma-70 family RNA polymerase sigma factor Tax=GWB2_Bacteroidetes_41_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.7
  • Coverage: 165.0
  • Bit_score: 157
  • Evalue 1.60e-35
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 189.0
  • Bit_score: 151
  • Evalue 3.00e-34

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Taxonomy

GWB2_Bacteroidetes_41_8_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 552
ATGAATAGTAACGGAAACATCTCAACATTCCCACACGTCTTAATTGAACAAGCTGCAAATGGCGATCAACGGGCATTTAAGGAAATTTACAATTCCCTGTCCGGTAAAATGTACAGTTTGTGCCTACGGTATGCACAGGATACTGATACTGCCAATGATTATTTCCAGGAAGGATTCATCAAGCTCTTCAGGAACTTGCCAAATTACAGGTTCGAAGGTTCCTTTGAAGGCTGGGCCCGCAGAATATTTGTTACGGTGTGCTTAGATGAGTTAAGAAAGAAGAAAATATCCTATGATGAGATTAATGATGATATCAATATCGTATCAAAAGAAATAAGTGTTCATGCAAAATTAGATATGCTGGATCTTATTAAATTATTACAAAAAATACCAGATAGTTACCGCACTATTGTGAATCTTTATATTATCGAAGGGTACAGTCATAAAGAAATTGCAGAAATATTAAATATTACGGAAAATGGCAGTAAATCAAAATTGCATAAAGCCCGTATTTATCTTAAAAAATTATTAGGTACGCAAGAAAGTGAATAA
PROTEIN sequence
Length: 184
MNSNGNISTFPHVLIEQAANGDQRAFKEIYNSLSGKMYSLCLRYAQDTDTANDYFQEGFIKLFRNLPNYRFEGSFEGWARRIFVTVCLDELRKKKISYDEINDDINIVSKEISVHAKLDMLDLIKLLQKIPDSYRTIVNLYIIEGYSHKEIAEILNITENGSKSKLHKARIYLKKLLGTQESE*