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scnpilot_p_inoc_scaffold_122_35

Organism: SCNpilot_P_inoc_Niastella_39_19

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 37640..37984

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L20 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU1_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 114.0
  • Bit_score: 201
  • Evalue 3.30e-49
50S ribosomal protein L20P similarity KEGG
DB: KEGG
  • Identity: 88.6
  • Coverage: 114.0
  • Bit_score: 201
  • Evalue 9.30e-50
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niast similarity UNIPROT
DB: UniProtKB
  • Identity: 88.6
  • Coverage: 114.0
  • Bit_score: 201
  • Evalue 4.60e-49

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 345
ATGCCACGTTCAGTAAATGCAGTAGCCAGCAGGGCCCGCCGCAAAAGAATATTAAAAGCTGCCAAAGGATATTATGGTAAGCGTAAAAACGTATATACCGTTGCTAAAAATGTAATGGAAAAAGGCTTAACATATAGTTATGTAGGCCGTAAAATCAAAAAAAGAGATTATCGTACATTATGGATTGCCCGTATCAATGCAGCTGTAAGGGCAGAAGGCCTTACGTACAGCGAGTTTATCCATAAATTAAATAGTAAGAATATAAGCCTAAACCGTAAGGTATTGGCTGATCTTGCCATGAATGAACCAGAAGCTTTTAAAAGCCTGGTTGATTCAGTAAAATAG
PROTEIN sequence
Length: 115
MPRSVNAVASRARRKRILKAAKGYYGKRKNVYTVAKNVMEKGLTYSYVGRKIKKRDYRTLWIARINAAVRAEGLTYSEFIHKLNSKNISLNRKVLADLAMNEPEAFKSLVDSVK*