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scnpilot_p_inoc_scaffold_262_11

Organism: SCNpilot_P_inoc_Niastella_39_19

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(11251..11985)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiracea similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 236.0
  • Bit_score: 313
  • Evalue 3.00e-82
Pseudouridine synthase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYY6_HALH1 similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 236.0
  • Bit_score: 313
  • Evalue 2.20e-82
  • rbh
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 64.8
  • Coverage: 236.0
  • Bit_score: 313
  • Evalue 6.10e-83

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Taxonomy

Haliscomenobacter hydrossis → Haliscomenobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 735
ATGGATACCAGTTTAAATAAATATATCAGCGATAGCGGCTTCTGCAGCCGGCGGGAAGCGGATAAATATATTGCTGATTGCAGGGTAACTATCAATGGCCGGGATGCCCATAAAGGGAACCGGGTTATGCCAGGCGATATTGTGAAAATAGATGGCGAACCTTTGAAAAAAAATGTTGCCCGGGTTTACATGATGCTGAATAAACCCAAGGGCATCACTTGTACCACAGACCAGAAAGACAAGAGCAATATCATTGATTATATCAATTATAAAACCCGGATTTTCCCAATAGGCCGGTTAGATAAACTTTCTGAAGGATTGATTTTCCTCACCAATGATGGCGATATCGTAAATAAAATATTACGGGCTGGCAATGGCCATGAAAAAGAATATATCGTAACTGTGAACAAGCCGATTACCCCGGGCTTCATTCATGCCATGCGTAATGGGGTTCGTATTTTAGGCACAACTACCCGTAAATGTTTTGTAAAACAGGAAGCCGAAGATCGTTTCCGCATCATTCTTACACAAGGATTAAACAGGCAAATAAGAAGAATGTGTGAAGCATTGGGCTTTACAGTAACCGCATTAAAAAGAGTACGAATTATGAATATGACAGTAAAAGGGCTTGCCCCGGGCAAATGGCGTTTTTTTACAATAGCAGAAATAGCCGCCATAAATGAGATGTTACTTCAAAGCAGCAATTTAGCAGATGGCGAAGGTATGGGCGAATAA
PROTEIN sequence
Length: 245
MDTSLNKYISDSGFCSRREADKYIADCRVTINGRDAHKGNRVMPGDIVKIDGEPLKKNVARVYMMLNKPKGITCTTDQKDKSNIIDYINYKTRIFPIGRLDKLSEGLIFLTNDGDIVNKILRAGNGHEKEYIVTVNKPITPGFIHAMRNGVRILGTTTRKCFVKQEAEDRFRIILTQGLNRQIRRMCEALGFTVTALKRVRIMNMTVKGLAPGKWRFFTIAEIAAINEMLLQSSNLADGEGMGE*