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scnpilot_p_inoc_scaffold_244_12

Organism: SCNpilot_P_inoc_Niastella_39_19

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(12552..13325)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Z0_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 250.0
  • Bit_score: 364
  • Evalue 8.60e-98
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 250.0
  • Bit_score: 364
  • Evalue 2.40e-98
Helix-turn-helix domain protein {ECO:0000313|EMBL:AEW01334.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella kor similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 250.0
  • Bit_score: 364
  • Evalue 1.20e-97

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 774
GTGCTAATCAAATTAGCCGTTATGTCACAAGCTGGTTTAAATTTAAAATACCTGCGCAAATTGCGTGGATGGACACAAGAAGAATTTGCACAAAGATTAGGCATTAAGCGATCCCTGGTAGGCGCTTATGAAGAAGAAAGAGCAGACCCCCGCTTAGATGTGCTTGAAATAATCGCCGATATGTTTAAGCTTACGCTGGATGAACTTTTACTAAAAGATTTAAACAACCAGGGAGGCAGTTACCTGCAAAAACGCAGGCAACAAAAGATGGCTACGGCCGATAGAAATCTCATCCACTTTGTTCCTGTAAAAGCAGCTGCAGGTTATTTAACCAGTTATGCCGATAGTGAATTTATTGATGAGCTGAATACCTTTACCCTACCCATGCTAAGTGGTGGCCATTACCGGGCATTTGAAATTGTGGGAGACAGTATGATGCCAACCCCCAGCGGTAGCGTTATAGTAGGTGAAAAAATAAACGGTATTGAGGATGTAAAAAATGATATGGCTTATATTGTAGTAAGCCGCAATGAAGGAATTGTATATAAACGCATCGTAAAAAATAACCGGTCCAAAGCAAAAGTTACATTGGTAAGTGATAATCCCAGTTACCAGCCCTATCAAATAAATACTGAAGATATTGTAGAACTTTGGCAGGCACAGGTTGTTATTGGCAAGGTACCTACCCAACAACGCTGGGATGTGAATAGCTTAGCCAGCCTTGTAAATAATTTACATAACCAGGTAACAACTTTAAAAAAGAAAATGAATTAA
PROTEIN sequence
Length: 258
VLIKLAVMSQAGLNLKYLRKLRGWTQEEFAQRLGIKRSLVGAYEEERADPRLDVLEIIADMFKLTLDELLLKDLNNQGGSYLQKRRQQKMATADRNLIHFVPVKAAAGYLTSYADSEFIDELNTFTLPMLSGGHYRAFEIVGDSMMPTPSGSVIVGEKINGIEDVKNDMAYIVVSRNEGIVYKRIVKNNRSKAKVTLVSDNPSYQPYQINTEDIVELWQAQVVIGKVPTQQRWDVNSLASLVNNLHNQVTTLKKKMN*