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scnpilot_p_inoc_scaffold_425_4

Organism: SCNpilot_P_inoc_Niastella_39_19

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(7448..8182)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A; K06173 tRNA pseudouridine38-40 synthase [EC:5.4.99.12] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 240.0
  • Bit_score: 295
  • Evalue 6.60e-77
tRNA pseudouridine synthase A n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TB28_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 56.2
  • Coverage: 240.0
  • Bit_score: 281
  • Evalue 7.00e-73
tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 56.2
  • Coverage: 240.0
  • Bit_score: 281
  • Evalue 2.00e-73

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Taxonomy

RIFOXYD2_FULL_Sphingobacteria_35_12_curated → Sphingobacteria → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 735
ATGGATAACCGTTATTTTATAGAAGTAGCTTATAACGGAAAATTATATGCTGGCTTTCAAAAACAAAAAAATGCTAATACAATACAGGCAGAGGTAGAAAAAGCACTTTTTACATTTTATAGGATTCTCATCCCATTAACCGGGTCTTCCCGGACGGATGCCGGTGTGCATGCTTTTCAAAATTACTTTCATGCCGATATGCCAATACCGGTTAAAGAAAAGGATACCTATAATTTGAATGCCATTTTACCGGCCGATATTGTAATAAAGAGTATGAAACGGGTGGCAGCAAATGCACATTGCAGGTTTGATGCAATTTCCAGGGCATATCAGTATGTATTATACCAATCAAAAAACCCTTTTTTGAATGATAGGGCCTATTATTATCCATACCTCCTCAATATGGGCCTTTTACAAGAAGCAGCAGGTTTATTGTACCGTTACCGTGACTTTGAGAGCTTTGCCAAAAAACATCACCAGGCACATACAACCAACTGCGAAATATTTTTAAGTGAATGGGAACAGCAAAGCGATTGTATTATTTACCGGGTTACGGCAAACAGGTTTTTACGGGGCATGGTAAGGGGCTTGGTAGGCACTATGTTAAGAGTAGGTAGGGGTAAATATTCATTAGATGAGTTTCAAAAAATTATAGAAAGTAAAAATATTTCTAAAACTGATTTTTCAGCACCGGCACAGGGGCTTACGCTGGTACAAATACATTTTGAACTATAA
PROTEIN sequence
Length: 245
MDNRYFIEVAYNGKLYAGFQKQKNANTIQAEVEKALFTFYRILIPLTGSSRTDAGVHAFQNYFHADMPIPVKEKDTYNLNAILPADIVIKSMKRVAANAHCRFDAISRAYQYVLYQSKNPFLNDRAYYYPYLLNMGLLQEAAGLLYRYRDFESFAKKHHQAHTTNCEIFLSEWEQQSDCIIYRVTANRFLRGMVRGLVGTMLRVGRGKYSLDEFQKIIESKNISKTDFSAPAQGLTLVQIHFEL*