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scnpilot_p_inoc_scaffold_46

Search features with annotation key words

Displaying items 1-30 of 314 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_46_1
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

174..2042
DNA (1869bp) protein (623aa)
ATP-dependent endonuclease family protein n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TS10_ACIAC rbh
ATP-dependent endonuclease family protein
ATP-dependent endonuclease family protein {ECO:0000313|EMBL:BAO29703.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sul
scnpilot_p_inoc_scaffold_46_2
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2050..3861
DNA (1812bp) protein (604aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfurit
UvrD/REP helicase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TS11_ACIAC rbh
UvrD/REP helicase
scnpilot_p_inoc_scaffold_46_3
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4220..5176
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2J4_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93685.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_46_4
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5363..6337
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2J6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL93687.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_46_5
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6349..7239
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2J7_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIL93688.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein rbh
scnpilot_p_inoc_scaffold_46_6
unknown

Not on your lists

7254..7349
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_46_7
Dechloromonas aromatica, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7511..7702
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DL2_DECAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ47069.1}; TaxID=159087 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Dechloromonas.;" source="Dechloromonas aromati
scnpilot_p_inoc_scaffold_46_8
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7711..9966
DNA (2256bp) protein (752aa)
Stem cell self-renewal protein Piwi domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH92_ACIET rbh
Uncharacterized protein {ECO:0000313|EMBL:KGE06224.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladio
stem cell self-renewal protein piwi domain-containing protein
scnpilot_p_inoc_scaffold_46_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9954..11207
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MH93_ACIET rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM32798.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (str
scnpilot_p_inoc_scaffold_46_10
Dickeya solani, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11378..11638)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000380EE71
Irep {ECO:0000313|EMBL:ERO59166.1}; TaxID=1231725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya solani D s0432-1.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_46_11
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12070..13632
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1F9Q3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EDT05715.1}; TaxID=396596 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
hypothetical protein
scnpilot_p_inoc_scaffold_46_12
unknown

Not on your lists

13819..14031
DNA (213bp) protein (71aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_46_13
BJP_08E140C01_Dechloromonas_61_78, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14136..19076
DNA (4941bp) protein (1647aa)
Helicase domain protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G569_RALS8 rbh
helicase domain-containing protein
Tax=BJP_08E140C01_Dechloromonas_61_78
scnpilot_p_inoc_scaffold_46_14
unknown

Not on your lists

19163..19339
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_46_15
Oxalobacter formigenes, Oxalobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19588..20424)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X7V0_OXAFO
Uncharacterized protein {ECO:0000313|EMBL:EEO29276.1}; TaxID=556269 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Oxalobacter.;" source="Oxalobacter formige
predicted protein
scnpilot_p_inoc_scaffold_46_16
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20421..21149)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Oxalobacter formigenes OXCC13 RepID=C3X7V1_OXAFO
predicted protein
Uncharacterized protein {ECO:0000313|EMBL:BAP87274.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
scnpilot_p_inoc_scaffold_46_17
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21561..21905
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN45709.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
scnpilot_p_inoc_scaffold_46_18
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21976..22899
DNA (924bp) protein (308aa)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugaki
arginase (EC:3.5.3.1)
Arginase n=1 Tax=mine drainage metagenome RepID=T0YVC6_9ZZZZ rbh
scnpilot_p_inoc_scaffold_46_19
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23071..24876
DNA (1806bp) protein (602aa)
Membrane protein containing Diguanylate cyclase, predicted domain protein (Fragment) n=4 Tax=mine drainage metagenome RepID=T1A4Z8_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN45706.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
GGDEF GAF signalling protein
scnpilot_p_inoc_scaffold_46_20
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


24954..26714
DNA (1761bp) protein (587aa)
Aspartate--tRNA ligase n=1 Tax=Rhodanobacter denitrificans RepID=I4WZH9_9GAMM
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:KGI77022.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas
aspartyl-tRNA synthetase
scnpilot_p_inoc_scaffold_46_21
Lysobacter dokdonensis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26970..27692
DNA (723bp) protein (241aa)
transcriptional regulator n=1 Tax=Pseudoxanthomonas sp. GW2 RepID=UPI0002FDD445
Probable transcriptional regulatory protein LF41_354 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobac
hypothetical protein
scnpilot_p_inoc_scaffold_46_22
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27695..28231
DNA (537bp) protein (179aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VY15_9GAMM
crossover junction endodeoxyribonuclease RuvC
scnpilot_p_inoc_scaffold_46_23
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28338..28952
DNA (615bp) protein (205aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID
Holliday junction DNA helicase RuvA n=1 Tax=Dyella japonica RepID=UPI00030511BE
ATP-dependent DNA helicase RuvA
scnpilot_p_inoc_scaffold_46_24
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28949..30850
DNA (1902bp) protein (634aa)
potassium transporter Kup n=1 Tax=Dyella ginsengisoli RepID=UPI000345891A rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimona
trkD; potassium transport protein Kup
scnpilot_p_inoc_scaffold_46_25
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31103..32992
DNA (1890bp) protein (630aa)
Probable potassium transport system protein kup n=1 Tax=Rhodanobacter sp. 115 RepID=I4W9Z0_9GAMM rbh
Probable potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacte
trkD; potassium transport protein Kup
scnpilot_p_inoc_scaffold_46_26
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33038..34081
DNA (1044bp) protein (348aa)
ruvB; ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteri
Holliday junction DNA helicase RuvB n=1 Tax=Dyella japonica RepID=UPI0002E55F31
scnpilot_p_inoc_scaffold_46_27

Not on your lists

34086..34526
DNA (441bp) protein (147aa)
Tol-pal system-associated acyl-CoA thioesterase {ECO:0000313|EMBL:EQD65825.1}; EC=3.1.2.- {ECO:0000313|EMBL:EQD65825.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metageno
Tol-pal system-associated acyl-CoA thioesterase n=1 Tax=mine drainage metagenome RepID=T1CFS2_9ZZZZ
4-hydroxybenzoyl-CoA thioesterase
scnpilot_p_inoc_scaffold_46_28

Not on your lists

34523..35248
DNA (726bp) protein (242aa)
Colicin uptake protein TolQ n=1 Tax=mine drainage metagenome RepID=T1CHJ9_9ZZZZ rbh
Colicin uptake protein TolQ {ECO:0000313|EMBL:EQD65824.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Cell division and transport-associated protein TolQ
scnpilot_p_inoc_scaffold_46_29
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35271..35729
DNA (459bp) protein (153aa)
TolR protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WZH0_9GAMM
Biopolymer transporter TolR {ECO:0000313|EMBL:KGI77015.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimon
Cell division and transport-associated protein TolR
scnpilot_p_inoc_scaffold_46_30
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35716..36642
DNA (927bp) protein (309aa)
F0F1-type ATP synthase, beta subunit n=1 Tax=Rhodanobacter denitrificans RepID=M4NJA7_9GAMM
F0F1-type ATP synthase, beta subunit
F0F1-type ATP synthase, beta subunit {ECO:0000313|EMBL:AGG87886.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanoba
Displaying items 1-30 of 314 in total

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