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scnpilot_p_inoc_scaffold_116

Search features with annotation key words

Displaying items 151-180 of 286 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_116_151
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

157868..158710
DNA (843bp) protein (281aa)
Putative metal-dependent membrane protease n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJE2_9GAMM
Putative metal-dependent membrane protease {ECO:0000313|EMBL:EIL87333.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" sour
abortive infection protein
scnpilot_p_inoc_scaffold_116_152
RBG_16_Ignavibacteria_36_9_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

159045..159770
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036B456B
hypothetical protein Tax=RBG_16_Ignavibacteria_36_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_116_153
unknown

Not on your lists

comp(160294..160422)
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_116_154
Gammaproteobacteria bacterium MFB021, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160446..160736)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Kushneria aurantia RepID=UPI00036857E6
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:KFF47923.1}; TaxID=1492922 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MFB021.;"
scnpilot_p_inoc_scaffold_116_155
DS1215_Halomonas_54_146, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160733..161068)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halomonas sp. GFAJ-1 RepID=H0J3M8_9GAMM
hypothetical protein Tax=DS1215_Halomonas_54_146
hypothetical protein
scnpilot_p_inoc_scaffold_116_156
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161127..162920)
DNA (1794bp) protein (598aa)
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase {ECO:0000313|EMBL:ACX94892.1}; EC=2.3.2.2 {ECO:0000313|EMBL:ACX94892.1};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillace
Gamma-glutamyltransferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KVW5_HALNC rbh
scnpilot_p_inoc_scaffold_116_157
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162980..164167)
DNA (1188bp) protein (396aa)
phosphoribosylaminoimidazole carboxylase n=1 Tax=Dyella japonica RepID=UPI0002FCCB83
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
phosphoribosylaminoimidazole carboxylase
scnpilot_p_inoc_scaffold_116_158
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164268..164828)
DNA (561bp) protein (187aa)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Dyella ginsengisoli RepID=UPI000348A19F
N5-carboxyaminoimidazole ribonucleotide mutase
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
scnpilot_p_inoc_scaffold_116_159
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

164864..165130
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000360087E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47285.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_116_160
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165254..167593
DNA (2340bp) protein (780aa)
Uncharacterized protein n=1 Tax=Rhodanobacter sp. 115 RepID=I4W7S8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN45223.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_p_inoc_scaffold_116_161
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167590..168450
DNA (861bp) protein (287aa)
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
nicotinate-nucleotide pyrophosphorylase n=1 Tax=Dyella japonica RepID=UPI0002D334C3
Nicotinate-nucleotide pyrophosphorylase {ECO:0000313|EMBL:GAN45224.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" sourc
scnpilot_p_inoc_scaffold_116_162
unknown

Not on your lists

168583..168957
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_116_163
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169137..173177)
DNA (4041bp) protein (1347aa)
ATP-dependent helicase HrpA n=1 Tax=Rhodanobacter denitrificans RepID=M4NJG2_9GAMM rbh
ATP-dependent helicase HrpA {ECO:0000313|EMBL:AGG90242.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacte
ATP-dependent helicase HrpA
scnpilot_p_inoc_scaffold_116_164
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

173268..175388
DNA (2121bp) protein (707aa)
Putative metalloendopeptidase n=1 Tax=Rhodanobacter sp. 115 RepID=I4WC77_9GAMM rbh
Putative metalloendopeptidase {ECO:0000313|EMBL:EIL97068.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanoba
putative metalloendopeptidase
scnpilot_p_inoc_scaffold_116_165
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175640..176236
DNA (597bp) protein (199aa)
Putative outer membrane protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWB4_9GAMM
Membrane protein {ECO:0000313|EMBL:KGI78438.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source="Oleiagrimonas soli.;"
membrane protein
scnpilot_p_inoc_scaffold_116_166
Rhodanobacter spathiphylli, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

176372..176875
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W4N3_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIL94424.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter s
hypothetical protein
scnpilot_p_inoc_scaffold_116_167
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(176930..177694)
DNA (765bp) protein (255aa)
two-component system response regulator protein
lytT; sensory transduction protein lytT; K02477 two-component system, LytT family, response regulator id=24658805 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Sensory transduction protein lytT {ECO:0000313|EMBL:CBH25993.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinib
scnpilot_p_inoc_scaffold_116_168
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(177691..178815)
DNA (1125bp) protein (375aa)
Putative regulator of cell autolysis n=1 Tax=Caulobacter sp. AP07 RepID=J3AQ46_9CAUL
yesM; two-component system sensor histidine kinase YesM Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
signal transduction histidine kinase LytS
scnpilot_p_inoc_scaffold_116_169
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

179361..180248
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00037719B3
Uncharacterized protein {ECO:0000313|EMBL:GAN45978.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
AraC family transcriptional regulator
scnpilot_p_inoc_scaffold_116_170
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180396..183437
DNA (3042bp) protein (1014aa)
Outer membrane cobalamin receptor protein n=1 Tax=Rhodanobacter denitrificans RepID=I4WWB0_9GAMM
Outer membrane cobalamin receptor protein {ECO:0000313|EMBL:AGG90558.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhod
outer membrane cobalamin receptor protein
scnpilot_p_inoc_scaffold_116_171
Mizugakiibacter sediminis, Mizugakiibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

183454..184461
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2U895_XANAP
Uncharacterized protein {ECO:0000313|EMBL:GAN45631.1}; TaxID=1475481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Mizugakiibacter.;" source="Mizugakiibact
hypothetical protein
scnpilot_p_inoc_scaffold_116_172
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184712..186082)
DNA (1371bp) protein (457aa)
UDP-N-acetylmuramoylalanine--D-glutamate ligase {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084542}; EC=6.3.2.9 {ECO:0000256|HAMAP-Rule:MF_00639, ECO:0000256|SAAS:SAAS00084342};; D-glutam
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI00031D1B77 rbh
UDP-N-acetylmuramoylalanine ligase
scnpilot_p_inoc_scaffold_116_173
Dyella japonica, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(186063..187484)
DNA (1422bp) protein (474aa)
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002FDBB80 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF47107.1}; TaxID=1217721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella japonica A8.;"
scnpilot_p_inoc_scaffold_116_174
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(187481..190201)
DNA (2721bp) protein (907aa)
Aspartate kinase {ECO:0000313|EMBL:KGI77280.1}; EC=2.7.2.4 {ECO:0000313|EMBL:KGI77280.1};; EC=4.1.1.20 {ECO:0000313|EMBL:KGI77280.1};; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacte
aspartate kinase (EC:4.1.1.20 2.7.2.4)
Bifunctional aspartate kinase/diaminopimelate decarboxylase protein id=2595783 bin=GWF1_Xanthomonadales_69_6 species=Pseudoxanthomonas spadix genus=Pseudoxanthomonas taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
scnpilot_p_inoc_scaffold_116_175
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

190573..191166
DNA (594bp) protein (198aa)
2Fe-2S iron-sulfur cluster binding domain-containing protein n=1 Tax=mine drainage metagenome RepID=T0ZEL4_9ZZZZ
(2Fe-2S)-binding protein {ECO:0000313|EMBL:KJV29668.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeoju
(2Fe-2S)-binding protein
scnpilot_p_inoc_scaffold_116_176
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191163..193403
DNA (2241bp) protein (747aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WSI6_9GAMM rbh
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:EIM02428.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomo
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
scnpilot_p_inoc_scaffold_116_177
Rhodanobacter sp. 115, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(193439..195715)
DNA (2277bp) protein (759aa)
ATP-dependent Clp protease ATP-binding subunit ClpA (EC:3.4.21.92)
ATP-dependent Clp protease subunit n=1 Tax=Rhodanobacter sp. 115 RepID=I4WEV9_9GAMM rbh
ATP-dependent Clp protease subunit {ECO:0000313|EMBL:EIL98000.1}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhod
scnpilot_p_inoc_scaffold_116_178
GWF1_Xanthomonadales_69_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(195757..196089)
DNA (333bp) protein (111aa)
ATP-dependent Clp protease adapter protein ClpS id=2473901 bin=GWF1_Xanthomonadales_69_6 species=Rhodanobacter sp. 115 genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria
clpS; putative ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS Tax=GWF1_Xanthomonadales_69_6_curated
clpS; Clp protease ClpS
scnpilot_p_inoc_scaffold_116_179
Oleiagrimonas soli, Oleiagrimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196198..196689
DNA (492bp) protein (164aa)
7,8-dihydro-8-oxoguanine-triphosphatase n=1 Tax=Dyella ginsengisoli RepID=UPI00034D8C01
7,8-dihydro-8-oxoguanine-triphosphatase {ECO:0000313|EMBL:KGI78345.1}; TaxID=1543381 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Oleiagrimonas.;" source=
7,8-dihydro-8-oxoguanine-triphosphatase
scnpilot_p_inoc_scaffold_116_180
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196686..197801
DNA (1116bp) protein (372aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadal
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VNK9_9GAMM
thiouridylase
Displaying items 151-180 of 286 in total

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