ggKbase home page

scnpilot_p_inoc_scaffold_49_43

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(50249..51169)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella japonica RepID=UPI0002DE4159 similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 343.0
  • Bit_score: 331
  • Evalue 9.60e-88
RNA polymerase-binding, DksA {ECO:0000313|EMBL:EQD28086.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 350.0
  • Bit_score: 324
  • Evalue 2.20e-85
RNA polymerase-binding protein DksA similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 316.0
  • Bit_score: 310
  • Evalue 6.50e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 921
ATGGCAAAACCGAAGCGCAGCGCCGCCAAGCATGGCGCCAAGAAAGCGAAGCCGGCGGCCAAGCCGGTCAAGGCCAGGCCCGCCCGGAAAACCGCCGCGAAGCCGGCGCGCAAGGCGCCCGCGAAAACCGCGCACAAGGCGCTGGCCAAGGCCGTGCGCAAGCCCGTCAAGGCGGCCAAGGCCGGCACCAAGCGTGCGTCCAGGACCATCAAAAAACAAATGACGAAAAAAGTTGGCAAGGCTCCAGCCGTGAAGAAACCCACACCCAAGACAACGAAAAAAGTCGCTGCCGCGACCCGCAAGCCGGACACCAAGTCGGCACCCGCATCGCGTGGCCATTCCACCCCGGCGACCCAGGTCGCGGCACATGGCGCGCCGCATCCGGTGCATACCCGCAAGCCCGCGCATGTCCGCCCCGTCGGGGGCGTGGCCGCGCGTCTCAGCGCCGCGCCAGCCGACGAGCAGACCATCACCCGCGAGGACGGCCGCTACGCGCTGCCCGCCAGCGTCAACGTCGACCTGCCCAAGGGCTACAAGCCTTCCGCGAAAGAGGAATACATGAACCCGAAGCAGCTGGCGTATTTCCGCCAGAAGCTGAAGGACTGGCGCGACCAGCTGGTCGAGGAATCGCGCCAGACCATGGAAAACCTGCGCGAGGAAGTGCGCGACGTGGGCGACGACGCCGAACGTGCCACCCGCGAAACCGAGAACTCGCTGGAACTGCGCACCCGCGATCGTTACCGCAAACTGATTTCCAAGATCGAGAAGGCCCTGCGCAAGATCGAGGAAGGCCGCTACGGTTACTGCGAGGAAACCGACGAGGAAATCGGCCTGGAACGCCTCGAGGCGCGCCCGATCGCAACCCTGTCGCTGGATGCGCAGGAGCGCCGCGAGCACATGCAGAAACAGATGGGCGACTGA
PROTEIN sequence
Length: 307
MAKPKRSAAKHGAKKAKPAAKPVKARPARKTAAKPARKAPAKTAHKALAKAVRKPVKAAKAGTKRASRTIKKQMTKKVGKAPAVKKPTPKTTKKVAAATRKPDTKSAPASRGHSTPATQVAAHGAPHPVHTRKPAHVRPVGGVAARLSAAPADEQTITREDGRYALPASVNVDLPKGYKPSAKEEYMNPKQLAYFRQKLKDWRDQLVEESRQTMENLREEVRDVGDDAERATRETENSLELRTRDRYRKLISKIEKALRKIEEGRYGYCEETDEEIGLERLEARPIATLSLDAQERREHMQKQMGD*